Job Description P76621 Confidence 99.94% Date Thu Jan 5 12:25:03 GMT 2012 Rank 12 Aligned Residues 214 % Identity 21% Template d1y0za_ SCOP info Double-stranded beta-helix Clavaminate synthase-like gamma-Butyrobetaine hydroxylase Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	N	Q	L	Q	P	L	L	L	K	T	L	L	N	R	A	E	G	A	L	L	I	N	A	V	G	V	D	D	V	K	Q	A	D	E	M	V	K	L	A	T	A	V	A	H	L	I	G	R	S	N	F	D	A	M	S	G	Q	Y	Y	A	R	F	V	V	K	N	V	D	N	S	D	S	Y	L	R	Q	P	H
Query Conservation
Alig confidence																.	.															.	.	.														.	.	.	.																								.	.
Template Conservation																.	.															.	.	.														.	.	.	.																								.	.
Template Sequence		T	I	K	T	Q	K	H	Y	L	D	S	L	L	H	.	.	E	S	G	A	V	L	F	R	G	F	P	V	N	S	.	.	.	A	D	D	F	N	D	V	V	E	A	F	G	F	.	.	.	.	D	E	L	P	Y	V	G	G	A	A	P	R	T	S	V	V	G	R	V	F	T	A	N	.	.	E	S	P	P	D
Template Known Secondary structure						T										.	.			S						S	S				S	.	.	.														.	.	.	.		B					S	S	S								T	T						.	.		S		T	T
Template Predicted Secondary structure																.	.															.	.	.														.	.	.	.																								.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	M	E	L	H	N	D	G	T	Y	V	E	E	I	T	D	Y	V	L	M	M	K	I	D	E	Q	N	M	Q	G	G	N	S	L	L	L	H	L	D	D	W	E	H	L	D	N	Y	F	R	H	.	P	L	A	R	R	P	M	R	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.										.	.														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.										.	.
Template Sequence		Q	K	I	P	F	H	H	E	M	A	Q	V	R	E	F	P	S	K	L	F	F	Y	C	E	I	E	.	P	K	C	G	G	E	T	P	I	.	.	V	L	S	H	V	V	Y	E	R	M	K	D	K	H	P	E	F	V	Q	R	L	E	E	H	G	L	L	Y	V	R	V	L	G	E	D	D	D	P	S	S	P	I
Template Known Secondary structure		S							T	T	T	T	S	S	S			S										.		S								.	.																																		S	S			T	T	S	T	T
Template Predicted Secondary structure																												.										.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
																															216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	P	S	K	N	V	S	K	D	V	F	H	P	V	F	D	V	D	Q	Q	G	R	P	V	M	R	Y	I	D	Q	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	G	W	K	S	T	F	L	T	H	D	K	N	L	A	E	Q	R	A	V	D	L	G	M	K	L	E	W	T	E	D	G	G	A	K	T	V	M	G	P	I	P	A	I	K	Y	D	E	S	R	N	R	K	V	W	F	N	S	M	V	A	A	Y	T	G	W	E	D	K	R	N	D	P	R	K	A	V	T	F
Template Known Secondary structure									T	T		S												T	T							T	T	S											S					T	T	T	T						S											B	T	T	B		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
					249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	P	K	D	F	E	E	G	V	W	L	S	E	L	S	D	A	I	E	T	S	K	G	I	L	S	V	P	V	P	V	G	K	F	L	L	I	N	N	L	F	W	L	H	G	R	D	R	F	T	P	H	P	D	L	R	R	E	L	M	R	Q
Query Conservation		.	.	.
Alig confidence		.	.	.																.	.	.	.	.																																	.	.	.
Template Conservation																				.	.	.	.	.																																	.	.	.
Template Sequence		G	D	G	K	P	L	P	A	D	I	V	H	D	C	L	R	I	L	.	.	.	.	.	E	E	E	C	V	A	V	P	W	Q	R	G	D	V	L	L	I	D	N	W	A	V	L	H	S	R	R	P	F	D	P	P	.	.	.	R	R	V	L	A	S	L
Template Known Secondary structure		T	T	S																.	.	.	.	.					B						T	T							T	T	T										S		.	.	.
Template Predicted Secondary structure																				.	.	.	.	.																																	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions