Job Description P76621 Confidence 100.00% Date Thu Jan 5 12:25:03 GMT 2012 Rank 2 Aligned Residues 224 % Identity 17% Template c3ms5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gamma-butyrobetaine dioxygenase; PDBTitle: crystal structure of human gamma-butyrobetaine,2-oxoglutarate2 dioxygenase 1 (bbox1) Resolution 1.82 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		K	I	L	D	D	L	C	A	N	Q	L	Q	P	L	L	L	K	T	L	L	N	R	A	E	G	A	L	L	I	N	A	V	G	V	D	D	V	K	Q	A	D	E	M	V	K	L	A	T	A	V	A	H	L	I	G	R	S	N	F	D	A	M	S	G	Q	Y	Y	A	R	.	F	V	V	K	N	V	D	N	S	D
Query Conservation																																																																							.
Alig confidence												.	.																								.	.	.	.													.	.	.	.	.	.	.	.	.										.
Template Conservation												.	.																								.	.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		D	F	E	D	V	L	R	Y	D	E	.	.	H	A	Y	K	W	L	S	T	L	K	K	V	G	I	V	R	L	T	G	A	S	D	K	.	.	.	.	P	G	E	V	S	K	L	G	K	R	M	G	.	.	.	.	.	.	.	.	.	F	L	Y	L	T	F	Y	G	H	T	W	Q	V	Q	D	K	I	D	A	N
Template Known Secondary structure												.	.													S									S	S	.	.	.	.	T	T										S	.	.	.	.	.	.	.	.	.					B	T	T	B	S	S				S			T	T		S
Template Predicted Secondary structure												.	.																								.	.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																											.	.	.	.	.	.																	.
Query SS confidence																																																											.	.	.	.	.	.																	.
Query Sequence		S	Y	L	R	Q	P	H	R	V	M	E	L	H	N	D	G	T	Y	V	E	E	I	T	D	Y	V	L	M	M	K	I	D	E	Q	N	M	Q	G	G	N	S	L	L	L	H	L	D	D	W	E	H	L	D	N	Y	F	R	.	.	.	.	.	.	H	P	L	A	R	R	P	M	R	F	A	A	P	P	S	K	.
Query Conservation																																																											.	.	.	.	.	.																	.
Alig confidence		.																																	.										.	.													.	.	.	.	.	.																	.
Template Conservation		.																																	.										.	.
Template Sequence		.	N	V	A	Y	T	T	G	K	L	S	F	H	T	D	Y	P	A	L	H	H	P	P	G	V	Q	L	L	H	C	I	K	Q	.	T	V	T	G	G	D	S	E	I	.	.	V	D	G	F	N	V	C	Q	K	L	K	K	N	N	P	Q	A	F	Q	I	L	S	S	T	F	V	D	F	T	D	I	G	V	D	Y
Template Known Secondary structure		.	S	G	G	G	S	S	S							S		T	T	S	S	S			S										.		S	S	S						.	.																																		S	S
Template Predicted Secondary structure		.																																	.										.	.
Template SS confidence
			191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
			221	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure		.																.																		.	.	.	.	.	.	.
Query SS confidence		.																.																		.	.	.	.	.	.	.
Query Sequence		.	N	V	S	K	D	V	F	H	P	V	F	D	V	D	Q	.	Q	G	R	P	V	M	R	Y	I	D	Q	F	V	Q	P	K	D	.	.	.	.	.	.	.	F	E	E	G	V	W	L	S	E	L	S	D	A	I	E	T	S	K	G	I	L	S	V	P	V	P	V	G	K	F	L	L	I	N	N	L	F	W	L
Query Conservation		.																.																		.	.	.	.	.	.	.
Alig confidence		.																.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	D	F	S	V	Q	S	K	H	K	I	I	E	L	D	D	K	G	Q	V	V	R	I	N	F	N	N	A	T	R	D	T	I	F	D	V	P	V	E	R	V	Q	P	F	Y	A	A	L	K	E	F	V	D	L	M	N	S	K	E	S	K	F	T	F	K	M	N	P	G	D	V	I	T	F	D	N	W	R	L	L
Template Known Secondary structure		S										S					T	T	S									T	T	T	B		S				S		G	G	G																	S	T	T	T								T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	R	D	R	F	T	P	H	P	D	L	R	R	E	L	M	R	Q	R	G	Y	F
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		H	G	R	R	S	Y	E	A	G	T	E	I	S	R	H	L	.	.	.	E	G	A	Y
Template Known Secondary structure											S	S						.	.	.
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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