Job Description P76621 Confidence 13.40% Date Thu Jan 5 12:25:03 GMT 2012 Rank 59 Aligned Residues 116 % Identity 11% Template c1ux6A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:thrombospondin-1; PDBTitle: structure of a thrombospondin c-terminal fragment reveals a2 novel calcium core in the type 3 repeats Resolution 1.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.									.	.	.	.												.	.	.	.
Query SS confidence																																			.	.	.	.	.									.	.	.	.												.	.	.	.
Query Sequence		A	H	L	I	G	R	S	N	F	D	A	M	S	G	Q	Y	Y	A	R	F	V	V	K	N	V	D	N	S	D	S	Y	L	R	.	.	.	.	.	Q	P	H	R	V	M	E	L	.	.	.	.	H	N	D	G	T	Y	V	E	E	I	T	.	.	.	.	D	Y	V	L	M	M	K	I	D	E	Q	N	M	Q	G
Query Conservation																																			.	.	.	.	.									.	.	.	.												.	.	.	.
Alig confidence														.	.												.								.	.	.	.	.									.	.	.	.												.	.	.	.
Template Conservation														.	.												.
Template Sequence		G	L	A	V	G	Y	D	E	F	N	A	V	.	.	D	F	S	G	T	F	F	I	N	T	E	.	R	D	D	D	Y	A	G	F	V	F	G	Y	Q	S	S	S	R	F	Y	V	V	M	W	K	Q	V	T	Q	S	Y	W	D	T	N	P	T	R	A	Q	G	Y	S	G	L	S	V	K	V	V	K	S	T	T	G
Template Known Secondary structure											S	S		.	.											S	.	S														T	T									S	S					S			S	S	S						S										S	S
Template Predicted Secondary structure														.	.												.
Template SS confidence
		977	.	.	980	.	.	.	.	.	.	.	.			.	990	.	.	.	.	.	.	.	.	.		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		G	N	S	L	L	L	H	L	D	D	W	E	H	L	D	N	Y	F	R	H	P	L	A	R	R	P	M	R	F	A	A	P	P	S	K	.	.	N	V	S	K	D	V	F	H	P	V	F	D	V	D	Q	Q	G	R	P	V	M	R	Y
Query Conservation																																					.	.
Alig confidence			.	.	.	.	.	.																													.	.
Template Conservation			.	.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	G	E	H	L	R	N	A	L	W	H	T	G	N	T	P	G	Q	V	R	T	L	W	H	D	P	R	H	I	G	W	K	D	F	T	A	Y	R	W	R	L	S	H	R	P	K	T	G	F	I	R	V	V	M
Template Known Secondary structure		T	.	.	.	.	.	.	T									S	S	S		B	T	T	T								T	T						T	T											T	T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		1054							.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions