Job Description P64455 Confidence 1.39% Date Thu Jan 5 12:08:30 GMT 2012 Rank 78 Aligned Residues 58 % Identity 12% Template c2p7vA_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulator of sigma d; PDBTitle: crystal structure of the escherichia coli regulator of sigma 70, rsd,2 in complex with sigma 70 domain 4 Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																.	.	.	.	.	.	.
Query SS confidence																										.	.																.	.	.	.	.	.	.
Query Sequence		L	D	E	V	I	A	R	V	D	A	A	I	E	E	S	V	I	A	H	M	N	E	L	L	.	.	I	A	L	S	D	D	A	E	L	S	R	E	D	R	Y	.	.	.	.	.	.	.	T	Q	Q	Q	R	L	R	T	A	I	A	H	H	G	R	K	H	K	E	D	M	E	A	R	H	E
Query Conservation																										.	.																.	.	.	.	.	.	.
Alig confidence											.	.	.													.	.																.	.	.	.	.	.	.															.	.	.	.
Template Conservation											.	.	.																																																			.	.	.	.
Template Sequence		Y	E	R	I	L	H	K	L	E	.	.	.	G	N	G	Q	L	A	R	A	A	K	I	W	P	Q	L	E	A	N	T	Q	Q	I	M	D	Y	Y	D	S	S	L	E	T	A	I	D	H	D	N	Y	L	E	F	Q	Q	V	L	S	D	I	G	.	.	.	.	E	A	L	E	A	R	F	V
Template Known Secondary structure							T	T			.	.	.	S																																			S															.	.	.	.
Template Predicted Secondary structure											.	.	.																																																			.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions