 |
Job Description | P42598 | Confidence | 21.69% | Date | Thu Jan 5 12:01:43 GMT 2012 |
Rank | 113 | Aligned Residues | 70 |
% Identity | 29% | Template | d2ioja1 |
SCOP info | MurF and HprK N-domain-like
| HprK N-terminal domain-like
| DRTGG domain
|
Resolution | 2.15 |
|
 |
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | L | L | L | G | A | R | P | G | N | R | Y | F | T | R | R | I | D | T | A | A | A | L | Y | H | A | G | K | V | K | W | L | L | V | S | G | D | N | G | R | K | N | Y | D | E | A | S | G | M | Q | Q | A | L | I | A | K | G | V | P | A | K | V | I | F | C | D | Y | A | G | F | S | T | L | D | S | V | V | R | A |
Query Conservation |   |
  |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
| . | . | . | . | . | . | . | . | . |
|
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|   |
|   | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
| . | . |
|   |
|   |   | . | . | . |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
A | L | V | T | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | R | S | D | L | L | L | T | A | L | E | X | P | N | V | R | C | L | I | L | T | G | N | L | . |
. |
. |
. |
. |
E | P | V | Q | L | V | L | T | K | A | E | E | R | G | V | P | V | . |
. |
I | L | T | G | H | . |
. |
. |
D | T | L | T | A | V | S | R | L |
Template Known Secondary structure |   |
 |  |  |  |  | T | . | . | . | . | . | . | . | . | . | T |
|  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  | . | . |  |  |
| S | S | . | . | . |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | |
|
. | . | . | . | . | |
|
|
. | . | . | . | 310 | . | . | . | . |
  |
  |   |
140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | V | F | G | E | N | H | I |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | S | V | F | G | R | T | R | I |
Template Known Secondary structure |   |
 | T | T |
| S | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
315 | . | . | . | . | 320 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|