Job Description P42598 Confidence 45.65% Date Thu Jan 5 12:01:43 GMT 2012 Rank 46 Aligned Residues 156 % Identity 13% Template d2djia3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 1.60

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	V	P	A	R	N	V	G	L	L	L	G	A	R	P	G	N	R	Y	F	T	R	R	I	D	T	A	A	A	L	Y	H	A	G	K	V	K	W	L	L	V	S	G	D	N	G	R	K	N	Y	D	E	A	S	G	M	Q	Q	A	L	I	A	K	G	V	P	A	K	V	I	F	C	D	Y	A	G	F	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		I	N	N	H	A	D	E	D	A	I	Y	S	I	D	V	G	.	.	.	.	.	.	.	N	S	T	Q	T	S	I	R	H	L	H	M	T	P	K	N	M	W	R	T	S	P	L	F	A	T	M	G	I	A	I	P	G	G	L	G	A	K	N	T	Y	P	D	R	Q	V	W	N	I	I	G	D	G	A	F	S	M
Template Known Secondary structure						S		T	T							S	S	.	.	.	.	.	.	.					G	G	G	G	T					T	T	S							S	S			T	T														T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390								.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure													.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	D	S	V	V	R	A	K	K	V	.	F	G	E	N	H	I	T	I	I	S	Q	E	F	H	N	Q	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	W	L	A	K	Q	Y	G	I	D	A	I	G	F	N	A	P	D	L	N	M	K	H	G	F	Y	T	Q	L	R	E
Query Conservation													.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		T	Y	P	D	V	V	T	N	V	R	Y	N	M	P	V	I	N	V	V	F	S	N	T	E	Y	A	F	I	K	N	K	Y	E	D	T	N	K	N	L	F	G	V	D	F	T	D	V	D	Y	A	K	I	A	E	A	Q	G	A	K	G	F	T	V	S	R	I	.	.	.	.	.	E	D	M	D	R	V	M	A	E
Template Known Secondary structure			G	G	G							T	T											S	B		T											S				S		B													T	T	S							B		.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.						.	.	.	.	.	.	520	.	.
		192	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		K	L	A	R	V	S	.	.	.	.	A	V	I	D	A	K	I	L	H	R	Q	P	K	Y	L	G	P	S	V	M	I	G	P
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.						.
Template Conservation																	.
Template Sequence		A	V	A	A	N	K	A	G	H	T	V	V	I	D	C	.	K	I	T	Q	D	R	P	I	P	V	E	T	L	K	L	D	S
Template Known Secondary structure								T	T								.				S						T	T	S		T	T		T
Template Predicted Secondary structure																	.
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.		.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions