Return to main results Retrieve Phyre Job Id

Job DescriptionP42598
Confidence30.61%DateThu Jan 5 12:01:43 GMT 2012
Rank73Aligned Residues53
% Identity23%Templatec3k32D_
PDB info PDB header:transferaseChain: D: PDB Molecule:uncharacterized protein mj0690; PDBTitle: the crystal structure of predicted subunit of trna2 methyltransferase from methanocaldococcus jannaschii dsm
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150
Predicted Secondary structure 























Query SS confidence 


























































Query Sequence  LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITI
Query Conservation 





       

  
   
   


   
  
  
  
 

   
  
     


Alig confidence 





......














































Template Conservation 
  


...... 

   
 

   
  
  
                   


   
 
Template Sequence  VLFSGG. . . . . . KDSSLSAVILKKLGYNPHLITINFGVIPSYKLAEETAKILGFKHKVI
Template Known Secondary structure 

SS......TT

SSS
TTT
Template Predicted Secondary structure 

......













Template SS confidence 


























































   8.10... ......20.........30.........40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions