Return to main results Retrieve Phyre Job Id

Job DescriptionP42598
Confidence22.54%DateThu Jan 5 12:01:43 GMT 2012
Rank107Aligned Residues71
% Identity11%Templatec2z9wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of pyridoxamine-pyruvate aminotransferase complexed2 with pyridoxal
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150.........160.........170........
Predicted Secondary structure 





















Query SS confidence 







































































Query Sequence  SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPD
Query Conservation    
   
   


   
  
  
  
 

   
  
     





  

 

   

  

      
  
Alig confidence 

































.




































Template Conservation       

   
     
  
 
 
 

  
    .   

 


                            
Template Sequence  KVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASL. ISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY
Template Known Secondary structure  TT
SS

SS
T.

TT

SS
S


T
Template Predicted Secondary structure 







.














Template SS confidence 







































































   47..50.........60.........70.........80 .........90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions