Job Description P0AE30 Confidence 99.96% Date Thu Jan 5 11:22:24 GMT 2012 Rank 5 Aligned Residues 200 % Identity 15% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	M	K	G	L	H	T	S	L	T	L	T	V	A	S	L	I	V	A	L	I	L	A	L	I	F	T	I	I	L	T	L	K	T	P	V	L	V	W	L	V	R	G	Y	I	T	L	F	T	G	T	P	L	L	V	Q	I	F	L	I	Y	Y	G	P	G	Q	F	.	P	T	L	Q	E	Y	P	A	L	W	H	L
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G
Template Known Secondary structure																																T		S	S	S	T	T								T	T					S													T		S	S	S	S									T	S	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		87	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																													.
Query SS confidence						.	.	.	.	.	.	.	.																																													.
Query Sequence		L	S	E	P	.	.	.	.	.	.	.	.	W	L	C	A	L	I	A	L	S	L	N	S	A	A	Y	T	T	Q	L	F	Y	G	A	I	R	A	I	P	E	G	Q	W	Q	S	C	S	A	L	G	M	S	K	K	D	.	T	L	A	I	L	L	P	Y	A	F	K	R	S	L	S	S	Y	S	N	E	V	V	L
Query Conservation						.	.	.	.	.	.	.	.																																													.
Alig confidence						.	.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F
Template Known Secondary structure						T	T	T	S																												G	G	G	S		T									T				S							T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		V	F	K	S	T	S	L	A	Y	T	I	T	L	M	E	V	M	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	Q	L	L	Y	G	R	T	Y	.	.	.	.	.	.	D	V	M	V	F	G	A	A	G	I	I	Y	L	V	V	N	G	L	L	T	L	M
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure				T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions