Job Description P0A8U2 Confidence 99.94% Date Thu Jan 5 11:08:45 GMT 2012 Rank 16 Aligned Residues 218 % Identity 19% Template d2ddra1 SCOP info DNase I-like DNase I-like Sphingomyelin phosphodiesterase-like Resolution 1.40

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.												.	.	.	.	.																																									.	.
Query SS confidence																			.	.	.	.	.												.	.	.	.	.																																									.	.
Query Sequence		E	E	R	I	R	I	L	V	W	N	I	Y	K	Q	Q	R	A	.	.	.	.	.	E	W	L	S	V	L	K	N	Y	G	K	.	.	.	.	.	D	A	H	L	V	L	L	Q	E	A	Q	T	T	P	E	L	V	Q	F	A	T	A	N	Y	L	A	A	D	Q	V	P	A	F	V	L	P	Q	H	P	S	.	.
Query Conservation																			.	.	.	.	.												.	.	.	.	.																																									.	.
Alig confidence																			.	.	.	.	.												.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		N	D	T	L	K	V	M	T	H	N	V	Y	M	L	S	T	N	L	Y	P	N	W	G	Q	T	E	R	A	D	L	I	G	A	A	D	Y	I	K	N	Q	D	V	V	I	L	N	E	V	F	D	N	S	A	S	D	R	L	L	G	N	L	K	K	E	Y	P	N	Q	T	A	V	L	G	R	S	S	G	S	E	W
Template Known Secondary structure																	T	T	T		T	T	S													S	T	T		S		S																					T	T	T								T	T	S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
																	109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	M	T	L	S	A	A	H	P	V	Y	C	C	P	L	R	E	R	E	P	I	L	R	L	A	K	S	A	L	V	T	V	Y	P	L	P	D	T	R	L	L	M	V	V	N	I	H	A	V	N	F	S	L	G	V	D	V	Y	S	K	Q	L	L	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.																	.
Template Conservation																																																				.	.																	.
Template Sequence		D	K	T	L	G	N	Y	S	S	S	T	P	E	D	G	G	V	A	I	V	S	K	W	P	I	A	E	K	I	Q	Y	V	F	A	K	G	C	L	S	N	K	G	F	V	Y	T	K	I	K	K	.	.	N	D	R	F	V	H	V	I	G	T	H	L	Q	A	E	S	.	P	A	S	V	R	T	N	Q	L	K	E
Template Known Secondary structure		S					S			T	T		S	S									S	S											S																	.	.	T	T															.
Template Predicted Secondary structure																																																				.	.																	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.
		174	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.												.	.	.	.	.	.	.	230	.
Predicted Secondary structure								.	.	.	.																					.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																					.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	D	Q	I	A	.	.	.	.	H	H	S	G	P	V	I	M	A	G	D	F	N	A	W	S	R	R	R	M	.	.	.	.	.	.	.	N	A	L	Y	R	F	A	R	E	M	S	L	R	Q	V	R	F	T	D	D	Q	R	R	.	.	.	.	.	.	.	.	.	.	.	R	A	F	G	R	P	L	D	F
Query Conservation								.	.	.	.																					.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																					.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	D	F	I	K	N	K	N	I	P	N	N	E	Y	V	L	I	G	G	D	M	N	V	N	K	I	N	A	E	N	N	N	D	S	E	Y	A	S	M	F	K	T	L	N	A	S	V	P	S	Y	T	G	H	T	A	T	W	D	A	T	T	N	S	I	A	K	Y	N	F	P	D	S	P	A	E	Y	L	D	Y
Template Known Secondary structure										T			T	T	S													T	T	T	S	S		T	T	S										T	B									S		S	B		T	T	T									T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		232	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.																		250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	Y	R	G	.	.	.	.	L	N	V	S	E	A	S	V	L	V	T	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	H	N	P	L	L	V	E	F	S	P
Query Conservation							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	A	S	K	D	H	A	N	P	S	Y	I	E	N	K	V	L	Q	P	K	S	P	Q	W	T	V	T	S	W	F	Q	K	Y	T	Y	N	D	Y	S	D	H	Y	P	V	E	A	T	I	S	M
Template Known Secondary structure					B	T	T	S				S																			T	T								S		S	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions