Job Description P0A8U2 Confidence 99.96% Date Thu Jan 5 11:08:45 GMT 2012 Rank 7 Aligned Residues 218 % Identity 17% Template c3g6sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative endonuclease/exonuclease/phosphatase PDBTitle: crystal structure of the2 endonuclease/exonuclease/phosphatase (bvu_0621) from3 bacteroides vulgatus. northeast structural genomics4 consortium target bvr56d Resolution 2.50 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.														.
Query SS confidence																.	.	.	.	.	.	.	.														.
Query Sequence		E	R	I	R	I	L	V	W	N	I	Y	K	Q	Q	.	.	.	.	.	.	.	.	R	A	E	W	L	S	V	L	K	N	Y	G	K	.	D	A	H	L	V	L	L	Q	E	A	Q	T	T	P	E	L	V	Q	F	A	T	A	N	Y	L	A	A	D	Q	V	P	A	F	V	L	P	Q	H	P	S	G	V	M	T
Query Conservation																.	.	.	.	.	.	.	.														.
Alig confidence																.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		T	D	V	R	W	A	T	F	N	I	R	Y	D	N	P	Q	D	S	L	N	N	W	Q	Y	R	K	D	R	V	C	Q	F	I	K	D	H	E	L	D	I	V	G	X	Q	E	V	L	H	N	Q	F	Q	D	L	R	A	G	L	P	E	Y	D	G	I	G	V	G	R	D	D	G	K	T	A	G	E	Y	A	P	L
Template Known Secondary structure																G	G	G	G	G	G	S	G	G	G	T											T	T		S						S	B													T	T								T	T	T	S	S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		L	S	A	A	H	P	V	Y	C	C	P	L	R	E	R	.	.	.	.	.	.	.	.	.	.	.	.	E	P	I	L	R	L	A	K	S	A	L	V	T	V	Y	P	L	P	.	D	T	R	L	L	M	V	V	N	I	H	A	V	N	F	S	L	G	V	D	V	Y	S	K	Q	L	L	P	I	G	D	Q	I	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																			.																	.	.
Template Conservation																																																																.	.
Template Sequence		F	Y	R	K	D	K	Y	E	V	L	D	S	N	T	F	W	L	A	E	N	P	D	S	V	G	X	X	G	W	D	A	V	C	V	R	I	A	T	W	A	K	F	K	D	K	A	T	G	K	I	F	X	A	V	N	T	H	F	D	H	V	G	.	.	E	E	A	R	R	Q	S	A	L	L	I	I	R	K	I	K
Template Known Secondary structure					T	T	T											S	S	S		T	T	S	T	T				T	T		S	S												T	T	T													S	S		.	.
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.													.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.
Predicted Secondary structure				.	.																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence				.	.																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		H	H	.	.	S	G	P	V	I	M	A	G	D	F	N	A	W	S	R	R	R	M	N	A	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	R	F	A	R	E	M	S	L	R	Q	V	R	F	T	D	D	Q	R	R	R	A	F	G	R	P	L	D	F	V	F	Y	R	.	G	L	N	V	S	E	A	S	V
Query Conservation				.	.																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence				.	.																					.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		E	I	V	G	E	R	P	A	V	V	T	G	D	F	N	V	T	D	A	S	D	A	Y	E	T	I	T	T	N	E	F	V	X	K	D	A	Y	K	T	A	A	R	V	T	G	V	D	Y	T	F	H	D	F	A	R	I	P	A	E	D	C	E	K	I	D	F	I	F	V	T	P	Q	V	L	V	K	S	C	E	I
Template Known Secondary structure				T	T	T	S									S	S		T	T	S								S	S	S	S										S						S		S	B		T	T	T	T	S		G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		245	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		L	V	T	R	A	.	.	.	.	S	D	H	N	P	L	L	V	E	F	S	P
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		P	A	E	V	P	E	A	L	L	S	D	H	N	P	Q	L	A	D	L	E	L
Template Known Secondary structure						S	S	S				S	B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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