|   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
. | 70 | . | |
|
. | . | . | . | . | . | . | . | 80 | . | . | . | |
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | R | I | L | V | W | N | I | Y | K | Q | Q | R | A | E | W | L | S | V | L | K | N | Y | G | K | . |
. |
. |
. |
D | A | H | . |
. |
L | V | L | L | Q | E | A | Q | T | T | P | E | . |
. |
L | V | Q | F | A | T | A | N | Y | L | A | A | D | Q | V | P | A | F | V | L | P | Q | H | P | S | G | V | M | T | L | S |
Query Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |   |
| . | . |
|
|   |
|
|
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   | . | . |   |
|   |
|
|   |
Template Sequence |   |
A | L | F | V | A | T | W | N | M | Q | G | Q | K | E | L | P | P | S | L | D | E | F | L | L | P | A | E | A | D | Y | A | Q | D | L | Y | V | I | G | V | Q | E | G | C | S | D | R | R | E | W | E | T | R | L | Q | E | T | L | G | P | H | Y | V | L | L | S | S | A | A | H | G | V | L | . |
. |
Y | M | S | L | F | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T |
| S | S |
|
| S |
|
|  |  |  |  | S |
| T | T |
|
| S |
|
| S |  |  |  |  |  |  |  | S |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  | T | T |  | . | . |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | |
|
. | . | . | . | . | . |
  |
  |   |
115 | . | . | . | |
|
|
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
A | A | H | P | . |
. |
. |
. |
. |
. |
V | Y | C | C | P | L | R | E | R | E | P | I | L | R | L | A | K | S | A | L | V | T | V | Y | P | L | P | D | T | R | L | L | M | V | V | N | I | H | A | V | N | F | S | L | G | V | D | V | Y | S | K | Q | L | L | P | I | G | D | Q | I | A | H | H | S | G | P | . |
. |
. |
. |
Query Conservation |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   |
| . |   |   |   |   |
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | R | D | L | I | W | F | C | S | E | V | E | C | S | T | V | T | T | R | I | V | S | Q | I | K | T | K | G | A | L | G | I | S | F | T | F | . |
F | G | T | S | F | L | F | I | T | S | H | F | T | S | G | D | G | K | V | A | E | R | L | L | D | Y | T | R | T | V | Q | A | L | V | L | P | R | N | V | P | D | T | N |
Template Known Secondary structure |   |
 | G | G | G | G | G | G | B | B |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  |
|
|
| S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| S | S | S |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | |
. | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | I | M | A | G | D | F | N | A | W | S | R | R | R | M | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | L | Y | R | F | A | R | E | M | S | L | R | Q | V | R | F | T | D | D | Q | R | R | . |
. |
. |
. |
. |
. |
. |
R | A | F |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
Template Sequence |   |
P | Y | R | S | S | A | A | D | V | T | T | R | F | D | E | V | F | W | F | G | D | F | N | F | R | L | S | G | T | V | V | D | V | D | V | P | A | L | L | Q | H | D | Q | L | I | R | E | M | R | K | G | S | I | F | K | G | F | Q | E | P | D | I | H | F | L | P | S | Y | K | F | D | I | G | K | D | T | Y | D | T | P |
Template Known Secondary structure |   |
T | T | T |
|
| T | T |
| G | G | G | S | S | S |  |  |  |  |  |  |  |
|
|
|
| B |
|
|
|
|
|
|
|
|  |  |  |  |  | T | T | B |  |  |  |  |  |  |  |  | T | S | S | S | T | T |
| B |
|
|
|
|
| S |
|
|
| B |
| B |
| T | T | S | S | S | B |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
457 | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . |
  |
  |   |
226 | . | . | . | 230 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | P | L | D | F | V | F | Y | R | . |
. |
. |
. |
. |
G | L | N | V | S | E | A | S | V | L | . |
V | T | R | A | S | D | H | N | P | L | L | V | E | F | S | P |
Query Conservation |   |
  |   |   |
|
|   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
| . |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|   |
|
Template Sequence |   |
S | Y | T | . |
D | R | V | L | Y | R | S | R | H | K | G | D | I | C | P | V | S | Y | S | S | C | P | G | I | K | T | S | D | H | R | P | V | Y | G | L | F | R | V |
Template Known Secondary structure |   |
B |
|
| . |  |  |  |  |  |  |  | S | S | T | T | S |  |  |  |  |  |  |  |  |
| T | T |
|
| S | S | S | S |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
553 | . | . | |
. | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . |
  |