Job Description P0A8U2 Confidence 99.92% Date Thu Jan 5 11:08:45 GMT 2012 Rank 25 Aligned Residues 211 % Identity 17% Template c2jc4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: 3'-5' exonuclease (nexo) from neisseria meningitidis Resolution 1.90 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	I	L	V	W	N	I	Y	K	Q	Q	R	A	E	W	L	S	V	L	K	N	Y	G	K	D	A	H	L	V	L	L	Q	E	A	Q	T	T	P	E	L	V	Q	F	A	T	A	N	Y	L	A	A	D	Q	V	P	A	F	V	L	P	Q	H	P	S	G	V	M	T	L	S	A	A	H	P	V	Y	C	C	P
Query Conservation
Alig confidence																																																																	.	.
Template Conservation																																																																	.	.
Template Sequence		M	K	I	T	T	W	N	V	N	S	L	N	V	R	L	P	Q	V	Q	N	L	L	A	D	N	P	P	D	I	L	V	L	Q	E	L	K	L	D	Q	D	K	F	P	A	A	A	L	Q	M	M	G	W	H	C	V	W	S	G	Q	K	T	Y	N	.	.	G	V	A	I	V	S	R	S	V	P	Q	D	V	H	F
Template Known Secondary structure										S															S	S			S									S		G	G	G	S							T	T	T									S	S	S		.	.							S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		L	R	E	R	E	P	I	L	R	L	A	K	S	A	L	V	T	V	Y	P	L	P	D	T	R	L	L	M	V	V	N	I	H	A	V	N	F	S	L	G	V	D	.	.	.	.	.	V	Y	S	K	Q	L	L	P	I	G	D	Q	I	A	H	H	S	G	P	V	I	M	A	G	D	F	N	A	W	S	R	R	R
Query Conservation																																												.	.	.	.	.
Alig confidence																				.	.	.	.																					.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		G	L	P	A	L	P	D	D	P	Q	R	R	V	I	A	A	T	V	.	.	.	.	S	G	V	R	V	I	N	V	Y	C	V	N	G	E	A	L	D	S	P	K	F	K	Y	K	E	Q	W	F	A	A	L	T	E	F	V	R	D	E	M	T	R	H	G	K	L	V	L	L	G	D	F	N	I	A	P	A	D	A
Template Known Secondary structure		S		T	T	S	T	T			S									.	.	.	.	T	T													S	T	T	S																						T	T		S	S												S	G	G
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		199																		200	.	.	.	.	.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	L	Y	R	F	A	R	E	M	S	L	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	T	D	D	Q	R	R	R	A	F	G	R	P	L	D	F	V	F	Y	R	G	.	.	.	L	N	V	S	E	A	S	V
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		D	C	Y	D	P	E	K	W	H	E	K	I	H	C	S	S	V	E	R	Q	W	F	Q	N	L	L	D	L	G	L	T	D	S	L	R	Q	V	H	P	E	G	A	F	Y	T	W	F	D	Y	R	G	A	M	F	Q	R	K	L	G	L	R	I	D	H	I	L	V	S	P	A	M	A	A	A	L	K	D	V	R	V
Template Known Secondary structure		G	B	S	S	G	G	G	G	T	T		T	T	S													T	T	T											S	S					B			T	T	T	T					T			B													T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		245						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		L	.	.	.	.	.	V	T	R	A	S	D	H	N	P	L	L	V	E	F	S
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		D	L	E	T	R	A	L	E	R	P	S	D	H	A	P	V	T	A	E	F	D
Template Known Secondary structure							T	S	S	S			S	B
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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