 |
Job Description | P37648 | Confidence | 7.44% | Date | Thu Jan 5 11:56:20 GMT 2012 |
Rank | 85 | Aligned Residues | 96 |
% Identity | 10% | Template | d1bxna2 |
SCOP info | Ferredoxin-like
| RuBisCO, large subunit, small (N-terminal) domain
| Ribulose 1,5-bisphosphate carboxylase-oxygenase
|
Resolution | 2.70 |
|
 |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
. | . | 220 | . | . | . | . | . | |
|
. | . | . | . | 230 | . | . | . | . | . | . | |
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | Y | Q | K | W | Y | T | P | D | A | . |
. |
. |
. |
M | T | L | L | V | V | G | N | . |
. |
V | D | A | R | S | V | V | D | Q | I | N | . |
. |
K | T | F | G | E | L | K | G | K | R | E | T | P | A | P | V | P | T | L | S | P | L | R | A | E | A | V | S | I | M | T | D | A | V | R | Q | D | R | L | S | I | M |
Query Conservation |   |
  |
|   |   |   |   |
|   |
|   |
| . | . | . | . |   |   |
|
|
|
|
|
| . | . |
|
|   |   |   |   |   |   |   |
|   | . | . |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|
|   |
|
|
Template Sequence |   |
G | Y | W | D | G | D | Y | V | P | K | D | T | D | L | L | A | L | F | R | I | T | P | Q | D | G | V | D | P | V | E | A | A | A | A | V | A | G | E | S | S | T | A | T | W | T | V | V | W | T | D | R | L | T | A | C | D | M | Y | R | A | K | A | Y | R | V | D | P | V | P | N | N | P | E | Q | F | F | C | Y | V | A |
Template Known Secondary structure |   |
T | T | B |
| T | T |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
| S | S |
|
| S | T |  |  |  |  |
|
| G | G | G | S |
|  |  |  |  |  |  |  |
| T | T |
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | D | T | P | W | Q | P | I | R | E | S | A | A | L | L | R | Y | W | R | A | D | L | A | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|   |
|
|
|   |
|
Template Sequence |   |
Y | D | L | S | L | F | E | E | G | S | I | A | N | L | T | A | S | I | I | G | N | V | F | S |
Template Known Secondary structure |   |
 |  | G | G | G | S |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T | G | G | G |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|