 |
Job Description | P37648 | Confidence | 7.58% | Date | Thu Jan 5 11:56:20 GMT 2012 |
Rank | 80 | Aligned Residues | 42 |
% Identity | 12% | Template | c3tl4X_ |
PDB info |
PDB header:ligase | Chain: X: PDB Molecule:glutaminyl-trna synthetase; |
PDBTitle: crystal structure of the trna binding domain of glutaminyl-trna2 synthetase from saccharomyces cerevisiae
|
Resolution | 2.30 Å |
|
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
. | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | K | I | K | D | F | Y | Q | K | W | Y | T | P | D | A | M | T | L | . |
. |
. |
. |
L | V | V | G | . |
N | V | D | A | R | S | V | V | D | Q | I | N | K | T | F | G | E | L | K |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |
| . | . | . | . |
|
|
|
| . |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
V | D | A | A | F | K | Y | V | K | A | N | G | E | A | S | T | K | X | G | X | N | E | N | S | G | V | G | I | E | I | T | E | D | Q | V | R | N | Y | V | X | Q | Y | I | Q | E | N | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
|  |  |  |  |  |  | T | T | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|