Job Description P37648 Confidence 99.85% Date Thu Jan 5 11:56:20 GMT 2012 Rank 30 Aligned Residues 185 % Identity 10% Template c3ivlA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative zinc protease; PDBTitle: the crystal structure of the inactive peptidase domain of a putative2 zinc protease from bordetella parapertussis to 2.2a Resolution 2.20 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	M	T	D	A	V	R	Q	D	R	L	S	I	M	W	D	T	P	W	Q	P	I	R	E	S	A	A	L	L	R	Y	W	R	A	D	L	A	R	E	A	L	F	W	H	V	Q	Q	A	L	S	A	S	N	S	K	D	I	G	L	G	F	D	C	R	V	L	Y	L	R	A	Q	C	A	I	N	I	E	S	P
Query Conservation
Alig confidence																					.	.																																	.
Template Conservation																					.	.																																	.
Template Sequence		V	T	L	R	R	A	G	G	T	P	L	V	A	A	X	Y	H	L	P	.	.	A	A	G	S	P	D	F	V	G	L	D	L	A	A	T	I	L	A	D	T	P	S	G	R	L	Y	H	A	L	V	P	T	.	K	L	A	S	G	V	F	G	F	T	X	D	Q	L	D	P	G	L	A	X	F	G	A	Q	L	Q
Template Known Secondary structure				S			S														.	.		T	T	S	T													T		T	T	T	S							T	T	T	.	T	S		S								T	T	S	S	S
Template Predicted Secondary structure																					.	.																																	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		344	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		N	D	.	K	L	N	S	N	L	N	L	V	A	R	E	L	A	K	V	R	D	K	G	L	P	E	E	E	F	N	A	L	V	A	Q	K	K	L	E	L	Q	K	L	F	A	A	Y	A	R	A	D	T	D	I	L	M	G	Q	R	M	R	S	L	Q	N	Q	V	V	D	I	A	P	E	Q	Y	Q	K	L	R	Q
Query Conservation				.
Alig confidence				.																																										.	.	.	.	.																					.	.	.	.	.
Template Conservation																																														.	.	.	.	.																					.	.	.	.	.
Template Sequence		P	G	X	D	Q	D	K	A	L	Q	T	L	T	A	T	L	E	S	L	S	S	K	P	F	S	Q	E	E	L	E	R	A	R	S	K	W	L	T	A	W	Q	Q	T	Y	.	.	.	.	.	A	D	P	E	K	V	G	V	A	L	S	E	A	I	A	S	G	D	W	R	.	.	.	.	.	L	F	F	L	Q	R
Template Known Secondary structure		T	T															T		T	T	T	S																							.	.	.	.	.		S														T	T		T	T	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390						.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410						.	.	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	N	S	L	T	V	E	M	L	N	Q	D	L	R	Q	Q	L	S	N	D	M	A	L	I	L	L	Q	P	K	G	E	P	E	F	N	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	V	R	D	A	K	L	D	D	V	Q	R	A	A	V	A	Y	L	V	R	S	N	R	T	E	G	R	Y	I	P	T	E	K	P	Q	R	A	P
Template Known Secondary structure																				S	S	G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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