Job Description P37648 Confidence 100.00% Date Thu Jan 5 11:56:20 GMT 2012 Rank 9 Aligned Residues 402 % Identity 16% Template c3hdiA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:processing protease; PDBTitle: crystal structure of bacillus halodurans metallo peptidase Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	G	T	L	S	N	G	L	Q	W	Q	V	L	T	T	P	Q	R	P	S	D	R	V	E	I	R	L	L	V	N	T	G	S	L	A	E	S	T	Q	Q	S	G	Y	S	H	A	I	P	R	I	A	L	T	Q	S	G	G	L	D	A	A	Q	A	R	S	L	W	Q	Q	G	I	D	P	K	R	P	M	P
Query Conservation
Alig confidence																								.	.																																																.	.	.	.
Template Conservation																								.	.																																																.	.	.	.
Template Sequence		I	N	T	M	T	L	D	N	G	V	R	I	I	T	E	K	M	S	T	V	R	S	.	.	V	S	I	G	I	W	V	G	T	G	S	R	Y	E	S	A	E	E	N	G	I	S	H	F	L	E	H	M	F	F	K	G	T	N	T	R	S	A	Q	E	I	A	E	F	F	D	S	.	.	.	.	I	G	G	Q	V
Template Known Secondary structure								T	T	S									T	T		S		.	.								S			G	G	G			G	G	G	T	T									T	T	S	B	B	S	S	S	B										T	.	.	.	.	T	T	S
Template Predicted Secondary structure																								.	.																																																.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		P	V	I	V	S	Y	D	T	T	L	F	N	L	S	L	P	N	N	R	N	D	L	L	K	E	A	L	S	Y	L	A	N	A	T	G	K	L	T	I	T	P	E	T	I	N	H	A	L	Q	S	Q	D	M	V	A	T	W	P	A	D	T	K	E	.	.	.	.	G	W	W	R	Y	R	L	K	G	S	T	L	L
Query Conservation																																																																	.	.	.	.
Alig confidence																		.	.	.																																													.	.	.	.
Template Conservation																		.	.	.
Template Sequence		N	A	F	T	S	K	E	Y	T	C	Y	Y	A	K	V	L	.	.	.	D	D	H	A	G	Q	A	I	D	T	L	S	D	M	F	F	H	S	T	F	Q	K	E	E	L	E	K	E	R	K	V	V	F	E	E	I	K	M	V	D	D	T	P	D	D	I	V	H	D	L	L	S	S	A	T	Y	G	K	H	S	L
Template Known Secondary structure							S	S										.	.	.	G	G	G														S	B																							T																T	T	S	G	G
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		189	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		G	H	D	P	A	D	P	L	K	.	.	Q	P	V	E	A	E	K	I	K	D	F	Y	Q	K	W	Y	T	P	D	A	M	T	L	L	V	V	G	N	V	D	A	R	S	V	V	D	Q	I	N	K	T	F	G	E	L	K	G	K	R	E	T	P	A	P	V	P	T	L	S	P	L	R	A	E	A	V	S	I	M
Query Conservation											.	.
Alig confidence											.	.																															.																			.	.	.
Template Conservation																																											.																			.	.	.
Template Sequence		G	Y	P	I	L	G	T	V	E	T	L	N	S	F	N	E	G	M	L	R	H	Y	M	D	R	F	Y	T	G	D	Y	V	V	I	S	V	A	G	N	V	H	.	D	E	L	I	D	K	I	K	E	T	F	S	Q	V	K	P	T	T	.	.	.	Y	N	Y	Q	G	E	K	P	M	F	L	P	N	R	I	V	R
Template Known Secondary structure		G	S		T	T																						S	S	T	T	T								S			.											T	T	S	S					.	.	.
Template Predicted Secondary structure																																											.																			.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	V	R	Q	D	R	L	S	I	M	W	D	T	P	W	Q	P	I	R	E	S	A	A	L	L	R	Y	W	R	A	D	L	A	R	E	A	L	F	W	H	V	Q	Q	A	L	S	A	S	N	S	K	D	I	G	L	G	F	D	C	R	V	L	Y	L	R	A	Q	C	A	I	N	I	E	S	P	N	D	K
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		K	K	E	T	E	Q	A	H	L	C	L	G	Y	P	G	L	P	I	G	D	K	D	.	.	V	Y	A	L	V	L	L	N	N	V	L	G	G	S	M	S	S	R	L	F	Q	D	I	R	E	K	R	G	L	C	Y	S	V	F	S	Y	H	S	S	F	R	D	S	G	M	L	T	I	Y	A	G	T	G	H	D	Q
Template Known Secondary structure						S													T	T		T	T	.	.												T	S	S	S	S	S							T	T	T	T				S										S	S												G	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	N	L	N	L	V	A	R	E	L	A	K	V	R	D	K	G	L	P	E	E	E	F	N	A	L	V	A	Q	K	K	L	E	L	Q	K	L	F	A	A	Y	A	R	A	D	T	D	I	L	M	G	Q	R	M	R	S	L	Q	N	Q	V	V	D	I	A	P	E	Q	Y	Q	K	L	R	Q	D	F	L	N
Query Conservation
Alig confidence																																										.	.	.	.	.																														.	.	.	.
Template Conservation																																										.	.	.	.	.																														.	.	.	.
Template Sequence		L	D	D	L	V	Y	S	I	Q	E	T	T	S	A	L	A	E	K	G	L	T	E	K	E	L	E	N	G	K	E	Q	L	K	G	S	L	M	L	S	L	.	.	.	.	.	E	S	T	N	S	R	M	S	R	N	G	K	N	E	L	L	L	K	K	H	R	S	L	D	E	M	I	E	Q	.	.	.	.	I	N
Template Known Secondary structure																		T	T																						T	.	.	.	.	.	T																T	S												.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.																														.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.					.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	V	E	M	L	N	Q	D	L	R	Q	Q	L	S	N	D	M	A	L	I	L	L	Q	P	K	G	E	P	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	Q	K	Q	D	V	S	R	L	A	K	I	L	L	S	A	S	P	S	I	S	L	I	N	A	N	G	E	L	P	K
Template Known Secondary structure																T	T	S									S	S		S			S
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.