Job Description P37648 Confidence 100.00% Date Thu Jan 5 11:56:20 GMT 2012 Rank 10 Aligned Residues 407 % Identity 16% Template c3amiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:zinc peptidase; PDBTitle: the crystal structure of the m16b metallopeptidase subunit from2 sphingomonas sp. a1 Resolution 2.40 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	P	A	W	Q	Q	G	T	L	S	N	G	L	Q	W	Q	V	L	T	T	P	Q	R	P	S	D	R	V	E	I	R	L	L	V	N	T	G	S	L	A	E	S	T	Q	Q	S	G	Y	S	H	A	I	P	R	I	A	L	T	Q	S	G	G	L	D	A	A	Q	A	R	S	L	W	Q	Q	G	I	D	P	K
Query Conservation
Alig confidence																												.	.																																																.	.	.	.
Template Conservation																												.	.																																																.	.	.	.
Template Sequence		P	A	A	S	T	F	E	T	T	L	P	N	G	L	K	V	V	V	R	E	D	H	R	A	P	T	.	.	L	V	H	M	V	W	Y	R	V	G	S	M	D	E	T	T	G	T	T	G	V	A	H	A	L	E	H	M	M	F	K	G	T	K	D	V	G	P	G	E	F	S	K	R	V	A	A	.	.	.	.	M
Template Known Secondary structure			G	G	G							T	T	S										S	S	S		.	.								S			G	G	G			T	T		T	T									T	T	S		B	S	S	S		T	T									.	.	.	.
Template Predicted Secondary structure																												.	.																																																.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		R	P	M	P	P	V	I	V	S	Y	D	T	T	L	F	N	L	S	L	P	N	N	R	N	D	L	L	K	E	A	L	S	Y	L	A	N	A	T	G	K	L	T	I	T	P	E	T	I	N	H	A	L	Q	S	Q	D	M	V	A	T	W	P	A	D	T	K	.	.	.	.	.	E	G	W	W	R	Y	R	L	K
Query Conservation																																																																				.	.	.	.	.
Alig confidence																						.	.	.																																												.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		G	G	R	D	N	A	F	T	T	R	D	Y	T	A	Y	Y	Q	Q	V	P	.	.	.	S	S	R	L	S	D	V	M	G	L	E	A	D	R	M	A	N	L	V	V	D	D	E	L	F	K	K	E	I	Q	V	I	A	E	E	R	R	W	R	T	D	D	K	P	R	S	K	A	Y	E	A	L	M	A	A	S	Y
Template Known Secondary structure		T									S	S										.	.	.	G	G	G															B																					T	T	T	T	S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		G	S	T	L	L	G	H	D	P	A	D	P	L	K	.	.	Q	P	V	E	A	E	K	I	K	D	F	Y	Q	K	W	Y	T	P	D	A	M	T	L	L	V	V	G	N	V	D	A	R	S	V	V	D	Q	I	N	K	T	F	G	E	L	K	G	K	R	E	T	P	A	P	V	P	T	L	S	P	L	R	A	E
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		V	A	H	P	Y	R	V	P	V	I	G	W	M	N	D	I	Q	N	M	T	A	Q	D	V	R	D	W	Y	K	R	W	Y	G	P	N	N	A	T	V	V	V	V	G	D	V	E	H	E	A	V	F	R	L	A	E	Q	T	Y	G	K	L	A	R	V	E	A	P	A	R	K	Q	Q	G	E	P	Q	Q	A	G	V
Template Known Secondary structure		S	S	S	G	G	G	S		T	T																							S	G	G	G								S												T	T	G	G	G	S																		S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.
Predicted Secondary structure																												.	.																																																.	.	.
Query SS confidence																												.	.																																																.	.	.
Query Sequence		A	V	S	I	M	T	D	A	V	R	Q	D	R	L	S	I	M	W	D	T	P	W	Q	P	I	R	.	.	E	S	A	A	L	L	R	Y	W	R	A	D	L	A	R	E	A	L	F	W	H	V	Q	Q	A	L	S	A	S	N	S	K	D	I	G	L	G	F	D	C	R	V	L	Y	L	R	A	.	.	.	Q	C
Query Conservation																												.	.																																																.	.	.
Alig confidence																												.	.																																																.	.	.
Template Conservation
Template Sequence		R	R	V	T	V	K	A	P	A	E	L	P	Y	L	A	L	A	W	H	V	P	A	I	V	D	L	D	K	S	R	D	A	Y	A	L	E	I	L	A	A	V	L	D	G	Y	D	G	A	R	M	T	R	Q	L	V	R	G	N	K	H	A	V	S	A	G	A	G	Y	D	S	L	S	R	G	Q	Q	G	L	F	I
Template Known Secondary structure											S	S													S	S	T	T	S																S	S	T	T	S						T	T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	I	E	S	P	N	D	K	L	N	S	N	L	N	L	V	A	R	E	L	A	K	V	R	D	K	G	L	P	E	E	E	F	N	A	L	V	A	Q	K	K	L	E	L	Q	K	L	F	A	A	Y	A	R	A	D	T	D	I	L	M	G	Q	R	M	R	S	L	Q	N	Q	V	V	D	I	A	P	E	Q
Query Conservation
Alig confidence																																																				.	.	.	.	.																			.	.	.	.
Template Conservation																																																				.	.	.	.	.																			.	.	.	.
Template Sequence		L	E	G	V	P	S	K	G	V	T	I	A	Q	L	E	T	D	L	R	A	Q	V	R	D	I	A	A	K	G	V	T	E	A	E	L	S	R	V	K	S	Q	M	V	A	G	K	V	Y	E	Q	.	.	.	.	.	D	S	L	M	G	Q	A	T	Q	I	G	G	L	E	V	L	G	L	.	.	.	.	S	W	R
Template Known Secondary structure								T	T																																											.	.	.	.	.		S													T	T	T		.	.	.	.		T	T
Template Predicted Secondary structure																																																				.	.	.	.	.																			.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.					.	.	410
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	K	L	R	Q	D	F	L	N	S	L	T	V	E	M	L	N	Q	D	L	R	Q	Q	L	S	N	D	M	A	L	I	L	L	Q	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	D	R	F	Y	Q	Q	L	R	S	V	T	A	A	E	V	K	A	A	A	A	R	L	L	T	D	D	T	L	T	V	A	N	L	V	P
Template Known Secondary structure											T	T											G	G	G	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.