Job Description P37648 Confidence 100.00% Date Thu Jan 5 11:56:20 GMT 2012 Rank 13 Aligned Residues 428 % Identity 11% Template c2fgeA_ PDB info PDB header:hydrolase, plant protein Chain: A: PDB Molecule:zinc metalloprotease (insulinase family); PDBTitle: crystal structure of presequence protease prep from2 arabidopsis thaliana Resolution 2.10 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	G	T	L	S	N	G	L	Q	W	Q	V	L	T	T	P	Q	R	P	S	D	R	V	E	I	R	L	L	V	N	T	G	S	L	A	E	S	T	Q	Q	S	G	Y	S	H	A	I	P	R	I	A	L	T	Q	S	G	G	L	D	A	A	Q	A	R	S	L	W	Q	Q	G	I	D	P	K	R	P	M	P
Query Conservation
Alig confidence																					.								.	.	.	.	.	.																																	.	.
Template Conservation																					.								.	.	.	.	.	.																																	.	.
Template Sequence		I	L	F	K	H	K	K	T	G	C	E	V	X	S	V	S	N	E	D	.	E	N	K	V	F	G	V	.	.	.	.	.	.	V	F	R	T	P	P	K	D	S	T	G	I	P	H	I	L	Q	H	S	V	L	C	G	S	R	K	Y	P	V	K	E	P	.	.	F	V	E	L	L	K	G	S	L	H	T	F	L
Template Known Secondary structure							T	T	T										S		.	S	S						.	.	.	.	.	.							S	S	S	S										T	T	S		B	T	T	B		S	S			.	.
Template Predicted Secondary structure																					.								.	.	.	.	.	.																																	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	I	V	S	Y	D	T	T	L	F	N	L	S	L	P	N	N	R	N	D	L	L	K	E	A	L	S	Y	L	A	N	A	T	G	K	L	T	I	T	P	E	T	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	L	Q	S	Q	D	M	V	A	T	W	P	A	D	T	K	E
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		N	A	F	T	Y	P	D	R	T	C	Y	P	V	A	S	T	.	.	N	T	K	D	F	Y	N	L	V	D	V	Y	L	D	A	V	F	F	P	K	C	V	D	D	A	H	T	F	Q	Q	E	G	W	H	Y	E	L	N	D	P	S	E	D	I	S	Y	K	G	V	V	F	N	E	X	K	G	V	Y	S	Q	P	D
Template Known Secondary structure							S	S									S	.	.	S																	S	B	G	G	G	T	S	S							T						S		T	T	S																T	T	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		176	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																.	.
Query SS confidence								.	.	.	.																.	.
Query Sequence		G	W	W	R	Y	R	.	.	.	.	L	K	G	S	T	L	L	G	H	D	P	A	D	P	L	.	.	K	Q	P	V	E	A	E	K	I	K	D	F	Y	Q	K	W	Y	T	P	D	A	M	T	L	L	V	V	G	N	V	D	A	R	S	V	V	D	Q	I	N	K	T	F	G	E	L	K	G	K	R	E	T	P
Query Conservation								.	.	.	.																.	.
Alig confidence								.	.	.	.																.	.
Template Conservation
Template Sequence		N	I	L	G	R	I	A	Q	Q	A	L	S	P	E	N	T	Y	G	V	D	S	G	G	D	P	K	D	I	P	N	L	T	F	E	E	F	K	E	F	H	R	Q	Y	Y	H	P	S	N	A	R	I	W	F	Y	G	D	D	D	P	V	H	R	L	R	V	L	S	E	Y	L	D	X	F	E	A	S	P	S	P	N
Template Known Secondary structure														T	T	S	G	G	G	S		T	T			T	T	T	G	G	G														S	S	G	G	G								S	S														T	T					S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		A	P	V	P	T	L	S	P	L	R	A	E	A	V	S	I	M	.	.	.	.	.	.	.	.	T	D	A	V	R	Q	D	R	L	S	I	M	W	D	T	P	W	Q	P	I	R	E	S	A	A	L	L	R	Y	W	R	A	D	L	A	R	E	A	L	F	W	H	V	Q	Q	A	L	S	A	S	N	S	K	D	I
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	K	I	K	F	Q	K	L	F	S	E	P	V	R	L	V	E	K	Y	P	A	G	R	D	G	D	L	K	K	K	H	X	L	C	V	N	W	L	L	S	E	K	P	L	D	L	Q	T	Q	L	A	L	G	F	L	D	H	L	X	L	G	T	P	A	S	P	L	R	K	I	L	L	E	S	G	L	G	E	A
Template Known Secondary structure			S									S	S												S	S	S		G	G	G												S	S																			S	S	T	T	S									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		G	L	G	F	D	C	R	V	L	Y	L	R	A	Q	C	A	I	N	I	E	.	S	P	N	D	K	L	N	S	N	L	N	L	V	A	R	E	L	A	K	V	R	D	K	G	L	P	E	E	E	F	N	A	L	V	A	Q	K	K	L	E	L	Q	K	L	F	A	A	Y	A	R	A	D	T	D	I	L	M	G	Q
Query Conservation																						.
Alig confidence																						.																																																			.
Template Conservation																																																																									.
Template Sequence		L	V	S	S	G	L	S	D	E	L	L	Q	P	Q	F	G	I	G	L	K	G	V	S	E	E	N	V	Q	K	V	E	E	L	I	X	D	T	L	K	K	L	A	E	E	G	F	D	N	D	A	V	E	A	S	X	N	T	I	E	F	S	L	R	E	N	N	T	G	S	F	P	.	R	G	L	S	L	X	L	Q
Template Known Secondary structure				S						S	S	S	S												G	G	G																																										T	T	S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		R	M	R	S	L	Q	N	Q	V	V	D	I	A	P	.	.	.	.	E	Q	Y	Q	K	L	R	Q	D	F	L	N	S	L	T	V	E	M	L	N	Q	D	L	R	Q	Q	L	S	N	D	M	A	L	I	L	L	Q	P	K	G	E	P	E	F	N	M	K	A	L	Q	A	V	W	D	Q	I	M	A
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		S	I	S	K	W	I	Y	D	X	D	P	F	E	P	L	K	Y	T	E	P	L	K	A	L	K	T	R	I	A	E	E	G	S	K	A	V	F	S	P	L	I	E	K	L	I	L	N	N	S	H	R	V	T	I	E	X	Q	P	D	P	E	K	A	T	Q	E	E	V	E	E	K	N	I	L	E	K
Template Known Secondary structure							T	T	T	S		S	S	G	G	G																														T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.