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Job DescriptionQ46814
Confidence100.00%DateThu Jan 5 12:34:41 GMT 2012
Rank16Aligned Residues589
% Identity28%Templated1vlba4
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution1.28

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   301........310.........320.........330.........340.........350.........360.........370.........380
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Query Sequence  MSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIE
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Template Conservation       
   

   
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Template Sequence  MSGPAAAAEDAIEIHPG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPNVYFEQPIVKGEDTGPIFASADVTVE
Template Known Secondary structure 

STT


SSTT...................................S
SSS

S
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   311........320....... ..330.........340.........350.....
 
   381........390.........400.. .......410.........420.........430.........440.........450.........
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Query Sequence  RTYNSTQAQQCPTETHICFTRM. DGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAW
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Template Conservation    
      
  


   

     
 
 
  


 
   
  

  



   
 
    





 
        

 
Template Sequence  GDFYVGRQPHMPIEPDVAFAYMGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPTSEALVAV
Template Known Secondary structure 






SS


TTS
S
S
T

GGG


S

TTGGGS
SS
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   356...360.........370.........380.........390.........400.........410.........420.........430.....
 
   460.........470.........480.........490.........500.........510.........520.........530.........
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Query Sequence  ATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNV
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Template Conservation   
   




    
 
       
             

 
 
       
 


                  
 


 
Template Sequence  AAMATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNI
Template Known Secondary structure  SS


SS
B



TT


TT

TTTTTTB


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   436...440.........450.........460.........470.........480.........490.........500.........510.....
 
   540.........550.........560.........570.........580.........590.........600.........610.........
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Query Sequence  DFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASC
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Template Sequence  RGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVF. . . . . . . . . . . .
Template Known Secondary structure 

SS

B


TTTTT

B

TT


TTS


S

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   516...520.........530.........540.........550.........560.........570.........580...
 
   620.........630......... 640.........650.........660.........670.........680.........690......
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Query Sequence  ALEEILRQGREMIQWSSPKP. . . QNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTK
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Template Conservation       
                       





      
        
 
 
  

 
 
  
    


  
   
Template Sequence  SLPDMIDQLRPKYQAALEKAQKESTATHKKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVG
Template Known Secondary structure 


SSSSSTTT

TTS





SSS
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   584.....590.........600.........610.........620.........630.........640.........650.........660...
 
   697..700.. .......710.........720.........730.........740.........750.........760.........770...
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Query Sequence  LAAEVL. . . HCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVR
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Template Sequence  TAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGYY. . TYDELKAADKPTKI
Template Known Secondary structure  GGGT

GGG


BTTTS




S
TT
B
TTSSB
..
TT


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   664.....670.........680.........690.........700.........710.........720....... ..730.........740.
 
   774.....780.........790.........800.........810.........820.........830.........840.........850...
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Query Sequence  GKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIY
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Template Conservation     ............                         
   




  

 
 
 
   
 
 
  


    


 
Template Sequence  TGN. . . . . . . . . . . . WTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIY
Template Known Secondary structure  ............
TT
B


TTT

SB

S
TTT


SS
S
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   742.. .....750.........760.........770.........780.........790.........800.........
 
   854.....860.........870.........880.........890.........900.........910.........920.........930...
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Query Sequence  GATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKSISEIGVNGAAPAIATAIHD
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Template Sequence  GGLAQGIGLALSEDFEDIKK. . . . HATLVGAGFPFIKQIPDKLDIVYVNHPRPDGPFGASGVGELPLTSPHAAIINAIKS
Template Known Secondary structure  T



STTT....SSSTTTTT


GGGS
S





TTSGGG



TTGGGSS
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   810.........820......... 830.........840.........850.........860.........870.........880.....
 
   934.....940.........950....
Predicted Secondary structure 






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Query Sequence  ACGIWLREWHFTPEKILTALE
Query Conservation 
 
 
    
 




  

 
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Template Conservation 
 
 
   

 




  

 
Template Sequence  ATGVRIYRLPAYPEKVLEALK
Template Known Secondary structure  S



BS


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   886...890.........900......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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