Job Description Q46814 Confidence 100.00% Date Thu Jan 5 12:34:41 GMT 2012 Rank 10 Aligned Residues 606 % Identity 30% Template d1rm6a2 SCOP info Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	I	D	E	A	M	A	E	D	A	P	V	V	H	D	E	P	V	V	Y	V	A	G	A	P	D	T	L	E	D	D	N	S	H	A	A	Q	R	G	E	H	M	I	I	N	F	P	I	G	S	R	P	R	K	N	I	A	A	S	I	H	G	H	I	G	D	M	D	K	G	F	A	D	A	D	V	I	I	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	P	K	A	A	M	K	A	G	A	I	A	L	H	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	N	N	I	L	R	E	V	H	A	E	F	G	D	V	A	A	A	F	A	E	A	D	L	I	R	E
Template Known Secondary structure									S	T	T				S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										S								T		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																																				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.
Predicted Secondary structure																								.	.																																																		.
Query SS confidence																								.	.																																																		.
Query Sequence		R	T	Y	N	S	T	Q	A	Q	Q	C	P	T	E	T	H	I	C	F	T	R	M	.	.	D	G	D	R	L	V	I	H	A	S	T	Q	V	P	W	H	L	R	R	Q	V	A	R	L	V	G	M	K	Q	H	K	V	H	V	I	K	E	R	V	G	G	G	F	G	S	K	Q	D	I	.	L	L	E	E	V	C
Query Conservation																								.	.																																																		.
Alig confidence																								.	.																																																		.
Template Conservation
Template Sequence		K	T	Y	T	F	A	E	V	N	H	V	H	M	E	L	N	A	T	L	A	E	Y	D	P	V	R	D	M	L	T	L	N	T	T	T	Q	V	P	Y	Y	V	H	L	K	V	A	A	C	L	Q	M	D	S	A	R	I	R	V	I	K	P	F	L	G	G	G	F	G	A	R	T	E	A	L	H	F	E	I	I	A
Template Known Secondary structure									B					S	S										T	T	T	T									S														T			G	G	G							S					T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	A	T	C	V	T	G	R	P	V	L	F	R	Y	T	R	E	E	E	F	I	A	N	T	S	R	H	V	A	K	V	T	V	K	L	G	A	K	K	D	G	R	L	T	A	V	K	M	D	F	R	A	N	T	G	P	Y	G	N	H	S	L	T	V	P	C	N	G	P	A	L	S	L	P	L	Y	P	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	L	A	R	K	A	K	G	T	V	R	L	L	Q	T	R	E	E	T	F	I	A	H	R	G	R	P	W	T	E	V	K	M	K	I	G	L	K	K	D	G	K	I	A	A	L	A	L	E	A	T	Q	A	G	G	A	Y	A	G	Y	G	I	I	T	I	L	Y	T	G	A	L	M	H	G	L	Y	H	I	P
Template Known Secondary structure									T	S																		B													T	T	S															S	S		T	T											T	T	S	S	S	B			S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	F	Q	V	T	T	Y	Y	S	N	I	C	P	N	G	A	Y	Q	G	Y	G	A	P	K	G	N	F	A	I	T	M	A	L	A	E	L	A	E	Q	L	Q	I	D	Q	L	E	I	I	E	R	N	R	V	H	E	G	Q	E	L	K	I	L	G	A	I	G	E	G	K	A	P	T	S	V	P	S	A	A
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		A	I	K	H	D	A	W	R	V	Y	T	N	T	P	P	C	G	A	M	R	G	H	G	T	V	D	T	R	A	A	F	E	A	L	L	T	E	M	G	E	E	L	G	I	D	S	L	K	I	R	Q	I	N	M	L	P	Q	I	P	Y	V	T	M	Y	A	Q	R	V	M	S	Y	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S	S						S	S	T	T	T																			T										T	B		S	S	S	S				T	T								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.							.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		S	C	A	L	E	E	I	L	R	Q	G	R	E	M	I	Q	W	S	S	P	K	P	Q	N	G	D	W	H	I	G	R	G	V	A	I	I	M	Q	K	S	G	I	P	D	I	.	.	.	.	.	.	D	Q	A	N	C	M	I	K	L	E	S	D	G	T	F	I	V	H	S	G	G	A	D	I	G	T	G	L	D
Query Conservation																																															.	.	.	.	.	.
Alig confidence		.	.																										.																		.	.	.	.	.	.
Template Conservation		.	.																										.
Template Sequence		.	.	G	V	P	E	C	L	E	K	V	K	A	A	S	G	W	E	E	R	K	G	K	L	P	K	G	.	R	G	L	G	I	A	L	S	H	F	V	S	G	T	S	T	P	K	H	W	T	G	E	P	H	A	T	V	N	L	K	L	D	F	D	G	G	I	T	L	L	T	G	A	A	D	I	G	Q	G	S	N
Template Known Secondary structure		.	.														T					T	T		S		T	T	.												S	S		S	S		S	S						S									T	T												S	S	S
Template Predicted Secondary structure		.	.																										.
Template SS confidence
				410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	V	T	K	L	A	A	E	V	L	H	C	P	P	Q	D	V	H	V	I	S	G	D	T	D	H	A	L	F	D	K	G	A	Y	A	S	S	G	T	C	F	S	G	N	A	A	R	L	A	A	E	N	L	R	E	K	I	L	F	H	G	A	Q	M	L	G	E	P	V	A	D	V	Q	L	A	T	P	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	A	S	Q	V	A	A	E	V	L	G	V	R	L	S	R	I	R	V	I	S	A	D	S	A	L	T	P	K	D	N	G	S	Y	S	S	R	V	T	F	M	V	G	N	A	S	I	S	A	A	E	E	L	K	G	V	L	V	K	A	A	A	K	K	L	D	A	R	E	E	D	I	E	V	I	D	E	M	F
Template Known Secondary structure													T			G	G	G						S	B	T	T	T	S						S		T	T																													T	T			G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		772	.	.	.	.	.			.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800															.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.
Predicted Secondary structure								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	G	K	K	G	.	.	E	V	S	F	G	D	I	A	H	K	G	E	T	G	T	G	F	G	S	L	V	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	Y	I	T	P	D	F	A	F	P	Y	G	A	N	F	A	E	V	A	V	N	T	R	T	G	E	I	R	L	D	K	F	Y	A
Query Conservation								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	S	G	S	Q	D	P	G	L	S	F	Q	E	V	V	K	A	A	M	V	D	S	G	T	I	T	V	K	G	T	Y	T	C	P	T	E	F	Q	G	D	K	K	I	R	G	S	A	I	G	A	T	M	G	F	C	Y	A	A	Q	V	V	E	A	S	V	D	E	I	T	G	K	V	T	A	H	K	V	W	V
Template Known Secondary structure				T	T		S	S														T	T	T		S											G	G	G	S			T	T		G	G	G	G	T	T			S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		836	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	C	G	T	P	V	N	P	E	L	A	L	G	Q	I	Y	G	A	T	L	R	A	I	G	H	S	M	S	E	E	I	I	Y	D	A	E	G	H	P	L	T	R	D	L	R	S	Y	G	A	P	K	I	G	D	I	P	R	D	F	R	A	V	L	V	P	S	D	D	K	V	G	P	F	G	A	K	S	I
Query Conservation
Alig confidence																																						.																						.
Template Conservation																																						.																						.
Template Sequence		A	V	D	V	G	K	A	L	N	P	L	A	V	E	G	Q	T	Q	G	G	V	W	M	G	M	G	Q	A	L	S	E	E	T	V	Y	D	.	N	G	R	M	V	H	G	N	I	L	D	Y	R	V	P	T	I	V	E	S	P	.	D	I	E	V	I	I	V	E	S	M	D	P	N	G	P	F	G	A	K	E	A
Template Known Secondary structure						S	S		S	S																					T							.	T	T			S			S	T	T	T	S					T	T	T			.												T	T	S	G	G	G
Template Predicted Secondary structure																																						.																						.
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.		.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.		.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
		916	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	I	G	V	N	G	A	A	P	A	I	A	T	A	I	H	D	A	C	G	I	W	L	R	E	W	H	F	T	P	E	K	I	L	T	A	L	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	G	M	L	A	G	F	L	P	A	I	H	E	A	V	Y	E	A	V	G	V	R	A	T	D	F	P	L	S	P	D	R	I	T	E	L	L	D	A
Template Known Secondary structure		S	S	T	T	T	T	T														S							S
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.