Return to main results Retrieve Phyre Job Id

Job DescriptionQ46814
Confidence100.00%DateThu Jan 5 12:34:41 GMT 2012
Rank11Aligned Residues620
% Identity24%Templated1n62b2
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution1.09

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   301........310.........320.........330.........340.........350.........360.........370.........380
Predicted Secondary structure 





























































Query SS confidence 















































































Query Sequence  MSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIE
Query Conservation       
    

  
                                                  

   

  
  


Alig confidence 
















......................








































Template Conservation   

 

    

 
   ......................                       
  

   


 

 


Template Sequence  VDPFKAMEPDAPLLRED. . . . . . . . . . . . . . . . . . . . . . IKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFAKAEVVSK
Template Known Secondary structure 

GGGTTSTT




GG......................GTT

TT
SSTT

S
Template Predicted Secondary structure 










......................





























Template SS confidence 















































































   147..150.........160... ......170.........180.........190.........200....
 
   381........390.........400... ......410.........420.........430.........440.........450...... .
Predicted Secondary structure 








..






















.
Query SS confidence 






















. .




















































.
Query Sequence  RTYNSTQAQQCPTETHICFTRMD. . GDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEV. C
Query Conservation         
 
  


   

   ..   
 
  


 
      

  



   
 
    







        .
Alig confidence 






















..




















































.
Template Conservation    
      
  


   

  
   
 
 
  


 
   
  

  



   



   





 
         
Template Sequence  DMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGGFGNKVGAYSGYVCA
Template Known Secondary structure 

B



SS

TTTT

SS


GGG



S

TTTTSS

Template Predicted Secondary structure 





































Template SS confidence 















































































   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   458.460.........470.........480.........490.........500.........510.........520...... ...530.....
Predicted Secondary structure 






















..





Query SS confidence 




































































. .








Query Sequence  AWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNG. . PALSLPLYP
Query Conservation 



   




   

 
 
     
       
 
   

 
 
       
 

       
    ..       
 
Alig confidence 




































































..








Template Conservation 
 

   





  

 
       
         
   

 
 
       
 


                  
 
 
Template Sequence  VVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYD
Template Known Secondary structure  SS


S



TT



SS





TT
TTTTGGGTTTTB
Template Predicted Secondary structure 































Template SS confidence 















































































   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   536...540.........550.... ... ..560.........570.........580.........590...... ...600.........610
Predicted Secondary structure 








.


.












...













Query SS confidence 


















.


.






































. . .













Query Sequence  CDNVDFQVTTYYSNICPNG. AYQ. GYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQ. . . ELKILGAIGEGKAP
Query Conservation 


       
 

     .
 
.
 
  
   
 
  

 

  

 

 


  
    

...              
Alig confidence 


















.


.






































...










...
Template Conservation   

       
 

  
 
 
 


 
 

  

 
  

 

  




 
 
  
    
        
    
 ...
Template Sequence  MPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFPYMAPLGWEYDSG. . .
Template Known Secondary structure 
S


SS

S
SS
TTTT

B

GGG
S
TTS



...
Template Predicted Secondary structure 






































...
Template SS confidence 















































































   365....370.........380.........390.........400.........410.........420.........430.........440.
 
   611........620.........630....... ..640.........650.........660. ........670
Predicted Secondary structure 








...........











.........



Query SS confidence 


























. . . . . . . . . . .























. . . . . . . . .








Query Sequence  TSVPSAASCALEEILRQGREMIQWSSP. . . . . . . . . . . KPQNGDWHIGRGVAIIMQKSGIPD. . . . . . . . . IDQANCMIK
Query Conservation                
            ...........         
 


      
   .........     
 
 
Alig confidence  .........

















...........























.........








Template Conservation  .........     
    
                           


 
      
                 
 
 
Template Sequence  . . . . . . . . . NYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIR
Template Known Secondary structure  .........
TTTS
S

BS


TTT
TT

Template Predicted Secondary structure  .........
































Template SS confidence 















































































   442.......450.........460.........470.........480.........490.........500.........510..
 
   671........680.........690.........700.........710.........720.........730.........740.........750
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKIL
Query Conservation 
  



 
  
  
 


  
   



  



   
 
   

   
    
  
  
   
 

  
   
  

 
Alig confidence 















































































Template Conservation 
  

 
 
  
  
 


  
  


 

 


  
 
 
   

   
   

 


 
   
 

  

  
  

 
Template Sequence  IHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQ
Template Known Secondary structure 
TTS
S


SSS
T

GGG

BTTTS




S
TT
TTTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   513......520.........530.........540.........550.........560.........570.........580.........590..
 
   751........760.........770..... ....780.........790..... ....800.........810.........820.....
Predicted Secondary structure 








..











...



















Query SS confidence 
























. .



















. . .





























Query Sequence  FHGAQMLGEPVADVQLATPGVVRGK. . KGEVSFGDIAHKGETGTGFG. . . SLVGTGSYITPDFAFPYGANFAEVAVNTRT
Query Conservation    

                     ..            
       ...          
      

   




 

Alig confidence 
























..



















...





























Template Conservation    

  
      
    
 
                                               
  





  
Template Sequence  MIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYFCIMDIDVDT
Template Known Secondary structure  TS
GGG
SSTTS

TTS
SS


SS
B

TTT
Template Predicted Secondary structure 










































Template SS confidence 















































































   593......600.........610.........620.........630.........640.........650.........660.........670..
 
   826...830.........840.........850.........860.........870.........880.........890.........900.....
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  GEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDD
Query Conservation 
   


  

 


  


 

 











  
 

   
  
 
 
     



   


    
 

    
Alig confidence 



































































.










Template Conservation 
 
 
       
 
 



  
 


 

   


 

 

   
  
         
 


  
 
.   
   
 
 
Template Sequence  GVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETP. KWETDYTVTPS
Template Known Secondary structure 


BS
S
T



TT

S
STTTS



TTTS
.






Template Predicted Secondary structure 






























.




Template SS confidence 















































































   673......680.........690.........700.........710.........720.........730.........740 .........750.
 
   906...910.........920.........930..... ....940.........950.....
Predicted Secondary structure 











...







Query SS confidence 





























. . .



















Query Sequence  KVGPFGAKSISEIGVNGAAPAIATAIHDAC. . . GIWLREWHFTPEKILTALEK
Query Conservation       









     

 


  
 ...
 
    
 




  

  
Alig confidence 





























...



















Template Conservation     
 






       






  
    
 
   

 


 
  

  
Template Sequence  PHHPIGAKGVGESPHVGGVPCFSNAVNDAYAFLNAGHIQMPHDAWRLWKVGEQ
Template Known Secondary structure  TTSTTSB


TTTTT




S


Template Predicted Secondary structure 





















Template SS confidence 




















































   752.......760.........770.........780.........790.........800....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions