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Job DescriptionQ46814
Confidence100.00%DateThu Jan 5 12:34:41 GMT 2012
Rank17Aligned Residues585
% Identity27%Templated1dgja4
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   301........310.........320.........330.........340.........350.........360.........370.... ....
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Query Sequence  MSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFAD. . ADVI
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Template Sequence  MSAPEAMAPDAIEIHPG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPNVYYDQLEEKGEDTVPFFNDPANVV
Template Known Secondary structure 

STT


SBTT....................................B
SSS
SS
TTS
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   311........320....... ..330.........340.........350....
 
   379380.........390.........400... ......410.........420.........430... ......440.........450......
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Query Sequence  IERTYNSTQAQQCPTETHICFTRMD. GDRLVIHASTQVPWHLRRQVARLVGMKQHK. VHVIKERVGGGFGSKQDILLEEV
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Template Conservation 

  
      
  


   

     
 
 
   

 
      

  


     
 
    


 

 
        
Template Sequence  AEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPTMEAL
Template Known Secondary structure 






SS


TTS


S
T

TTTT


S

TTGGGS
SS
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   355....360.........370.........380.........390.........400.........410.........420.........430....
 
   457..460.........470.........480.........490.........500.........510.........520.........530......
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Query Sequence  CAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPC
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Template Sequence  VGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGI
Template Known Secondary structure 
S


SS
B



TTS


S

TTTTTTB

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   435....440.........450.........460.........470.........480.........490.........500.........510....
 
   537..540.........550.........560.........570.........580.........590.........600.........610......
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Query Sequence  DNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSA
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Template Sequence  ANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVM. . . . . . . . .
Template Known Secondary structure  S

SS

B


TTTTT

B

TT


TTS


S

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   515....520.........530.........540.........550.........560.........570.........580.....
 
   617..620.........630....... ..640.........650.........660.........670.........680.........690...
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Query Sequence  ASCALEEILRQGREMIQWSSP. . . KPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTV
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Template Sequence  . . . SLPEMFDKMRPYYEESKKRVKERSTAEIKRGVGVALGVYGAGLDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAG
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TT

SSSSSSS

TTS




SSS
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   586...590.........600.........610.........620.........630.........640.........650.........660..
 
   694.....700. ........710.........720.........730.........740.........750.........760.........770
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Query Sequence  VTKLAAEV. . . LHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPG
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Template Sequence  SLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMR
Template Known Secondary structure  TGGGT

GGGSBTTTS




S
TT
TTTTB
SSSSB

TT


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   663......670.........680.........690.........700.........710.........720.........730.........740..
 
   771........780.........790.........800.........810.........820.........830.........840.........850
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Query Sequence  VVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALG
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Template Sequence  YDGKWTAPA. . . . . . . . . . . . . . . . KDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDG
Template Known Secondary structure 
S
................B


TTS
SB

STTTT
BS
S
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   743......750. ........760.........770.........780.........790.........800......
 
   851........860.........870.........880.........890.........900.........910.........920.........930
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Query Sequence  QIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKSISEIGVNGAAPAIATA
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Template Sequence  QIYGGLAQGVGLALSEDY. . . . EDLKKHSTMGGAGIPSIKMIPDDIEIVYVETPRKDGPFGASGVGEMPLTAPHAAIING
Template Known Secondary structure  T


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STTTTSSTTTTT


GGGS
S





TTSGGGB


TTGGGSS
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   807..810.........820.... .....830.........840.........850.........860.........870.........880..
 
   931........940.........950...
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Query Sequence  IHDACGIWLREWHFTPEKILTAL
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Template Sequence  IYNACGARVRHLPARPEKVLEAM
Template Known Secondary structure  S



BS


T
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   883......890.........900.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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