 |
Job Description | Q46814 | Confidence | 52.27% | Date | Thu Jan 5 12:34:41 GMT 2012 |
Rank | 111 | Aligned Residues | 78 |
% Identity | 15% | Template | c3b64A_ |
PDB info |
PDB header:cytokine | Chain: A: PDB Molecule:macrophage migration inhibitory factor-like |
PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
|
Resolution | 1.03 Å |
|
 |
  |   |
690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | |
|
. | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | T | V | V | T | K | L | A | A | E | V | L | H | C | P | P | Q | D | V | H | V | I | S | G | D | T | D | H | A | L | F | D | K | G | A | . |
. |
Y | A | S | S | G | T | C | F | S | G | N | A | A | R | L | A | A | E | N | L | R | E | K | I | L | F | H | G | A | Q | M | L | G | E | P | V | A | D | V | Q | L | A |
Query Conservation |   |
  |   |
|   |   |   |
|
|
|
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |
| . | . |   |   |
|   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|
|
|
|   |
Template Sequence |   |
L | A | Q | V | Y | R | A | V | T | R | D | V | L | G | K | P | E | D | L | V | M | M | T | F | H | D | S | T | P | M | H | F | F | G | S | T | D | P | V | A | C | V | R | V | E | A | L | G | G | Y | G | P | S | E | P | E | K | V | T | S | I | V | T | A | A | I | T | K | E | C | G | I | V | A | D | R | I | F | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | S |
| S |
| G | G | G |
|  |  |  |  |  |
| S |
|
|
|
| B | T | T | B |
| S | S |
|  |  |  |  |  |  |
| T | T |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|