Job Description Q46814 Confidence 100.00% Date Thu Jan 5 12:34:41 GMT 2012 Rank 8 Aligned Residues 727 % Identity 28% Template c2w54F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase from2 rhodobacter capsulatus in complex with bound inhibitor3 pterin-6-aldehyde Resolution 3.30 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		V	I	G	K	H	Y	P	K	T	D	A	A	K	M	V	Q	A	K	P	C	Y	V	E	D	R	V	T	A	.	D	A	C	V	I	K	M	L	R	S	P	H	A	H	A	L	I	T	H	L	D	V	S	K	A	E	A	L	P	G	V	V	H	V	I	T	H	L	N	C	P	D	I	Y	Y	T	P	G	G	Q	S
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		S	V	G	K	P	L	P	H	D	S	A	R	A	H	V	T	G	Q	A	R	Y	L	D	D	L	P	C	P	A	N	T	L	H	L	A	F	G	L	S	T	E	A	S	A	A	I	T	G	L	D	L	E	P	V	R	E	S	P	G	V	I	A	V	F	T	A	A	D	L	P	H	D	N	D	A	S	P	A	P	S
Template Known Secondary structure			T	T						T	T							T					G	G	G	S				T	T												S	S														S	T	T							G	G	G		S	S						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	P	S	P	L	D	R	R	M	F	G	K	K	M	R	H	V	G	D	R	V	A	A	V	V	A	E	S	E	E	I	A	L	E	A	L	K	L	I	D	V	E	Y	E	V	L	K	P	V	M	S	I	D	E	A	M	A	E	D	A	P	V	V	H	D	E	P	V	V	Y	V	A	G	A	P	D	T	L
Query Conservation
Alig confidence		.	.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	P	E	P	V	L	A	T	G	E	V	H	F	V	G	Q	P	I	F	L	V	A	A	T	S	H	R	A	A	R	I	A	A	R	K	A	R	I	T	Y	A	P	R	P	A	I	L	T	L	D	Q	A	L	A	A	D	S	R	F	E	G	G	P	V	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.				S	S			S				S	T	T									S	S									T	T													S								T		B	S	T	T	S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	D	N	S	H	A	A	Q	R	G	E	H	M	I	I	N	F	P	I	G	S	R	P	R	K	N	I	A	A	S	I	H	G	H	I	G	D	M	D	K	G	F	A	D	A	D	V	I	I	E	R	T	Y	N	S	T	Q	A	Q	Q	C	P	T	E	T	H	I	C	F	T	R	M	D	G	D	R	L	V	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	R	G	D	V	E	T	A	L	A	G	A	A	H	L	A	E	G	C	F	E	I	G	G	Q	E	H	F	Y	L	E	G	Q	A	A	L	A	L	P	A	E	G	G	V	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S								T		S												B					S	S										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.			.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		H	A	S	T	Q	V	P	W	H	L	R	R	Q	V	A	R	L	V	G	M	K	Q	H	K	V	H	V	I	K	E	R	V	G	G	G	F	G	S	K	Q	D	I	L	.	.	L	E	E	V	C	A	W	A	T	C	V	T	G	R	P	V	L	F	R	Y	T	R	E	E	E	F	I	A	N	T	S	R	H	V	A
Query Conservation																																													.	.
Alig confidence																																													.	.
Template Conservation
Template Sequence		H	C	S	S	Q	H	P	S	E	I	Q	H	K	V	A	H	A	L	G	L	A	F	H	D	V	R	V	E	M	R	R	M	G	G	G	F	G	G	K	E	S	Q	G	N	H	L	A	I	A	C	A	V	A	A	R	A	T	G	R	P	C	K	M	R	Y	D	R	D	D	D	M	V	I	T	G	K	R	H	D	F
Template Known Secondary structure						S														T			G	G	G							B		S			T	T	T	T	S	S	T	T															S	S															S			B
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	T	V	K	L	G	A	K	K	D	G	R	L	T	A	V	K	M	D	F	R	A	N	T	G	P	Y	G	N	H	S	L	T	V	P	C	N	G	P	A	L	S	L	P	L	Y	P	C	D	N	V	D	F	Q	V	T	T	Y	Y	S	N	I	C	P	N	G	A	Y	Q	G	Y	G	A	P	K	G	N	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	R	Y	R	I	G	A	D	A	S	G	K	L	L	G	A	D	F	V	H	L	A	R	C	G	W	S	A	D	L	S	L	P	V	C	D	R	A	M	L	H	A	D	G	S	Y	F	V	P	A	L	R	I	E	S	H	R	L	R	T	N	T	Q	S	N	T	A	F	R	G	F	G	G	P	Q	G	A	L	G
Template Known Secondary structure											S	S	S															S	S		T	T											T	T	T	T	T	B			S	S											S	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.						640	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		I	T	M	A	L	A	E	L	A	E	Q	L	Q	I	D	Q	L	E	I	I	E	R	N	R	V	H	E	G	Q	E	L	K	I	L	G	A	I	G	E	G	K	A	P	T	S	V	P	S	A	A	S	C	A	L	E	E	I	L	R	Q	G	R	E	M	I	Q	W	S	S	P	K	P	.	.	.	.	.	Q	N	G
Query Conservation																																																																										.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.
Template Sequence		M	E	R	A	I	E	H	L	A	R	G	M	G	R	D	P	A	E	L	R	A	L	N	F	Y	D	P	P	E	K	K	T	Q	T	T	H	Y	G	Q	E	V	A	D	C	.	.	.	.	.	.	.	.	V	L	G	E	L	V	T	R	L	Q	K	S	A	N	F	T	T	R	R	A	E	I	A	A	W	N	S	T
Template Known Secondary structure													T	T									T	T	B					.					B		T	T	S		B					.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.									.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.					.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		D	W	H	I	G	R	G	V	A	I	I	M	Q	K	S	G	I	P	D	I	.	.	.	.	D	Q	A	N	C	M	I	K	L	E	S	D	G	T	F	I	V	H	S	G	G	A	D	I	G	T	G	L	D	T	V	V	T	K	L	A	A	E	V	L	H	C	P	P	Q	D	V	H	V	I	S	G	D	T	D	H
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.
Template Conservation
Template Sequence		N	R	T	L	A	R	G	I	A	L	S	P	V	K	F	G	I	S	F	T	L	T	H	L	N	Q	A	G	A	L	V	Q	I	Y	T	D	G	S	V	A	L	N	H	G	G	T	E	M	G	Q	G	L	H	A	K	M	V	Q	V	A	A	A	V	L	G	I	D	P	V	Q	V	R	I	T	A	T	D	T	S	K
Template Known Secondary structure			S	S															S		S	S	G	G	G											T	T	S							S			B	S	S	S															T	S		G	G	G								T	T	T
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.												.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	F	D	K	G	A	Y	A	S	S	G	T	C	F	S	G	N	A	A	R	L	A	A	E	N	L	R	E	K	I	L	F	H	G	A	Q	M	L	G	E	P	V	A	D	V	Q	L	A	T	P	G	V	V	R	G	K	K	G	E	V	S	F	G	D	I	A	.	.	.	.	.	.	.	.	.	.	.	H	K
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.
Template Sequence		V	P	N	T	S	A	T	A	A	S	S	G	A	D	M	N	G	M	A	V	K	D	A	C	E	T	L	R	G	R	L	A	G	F	V	A	A	R	E	G	C	A	A	R	D	V	I	F	D	A	G	Q	V	Q	A	S	G	K	S	.	W	R	F	A	E	I	V	A	A	A	Y	M	A	R	I	S	L	S	A	T
Template Known Secondary structure		S		S				S		T	T																													T	T	S		G	G	G					T	T					T	T			.													T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
		788	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	G	T	G	F	G	S	L	V	G	T	G	S	Y	I	T	P	D	F	A	F	P	Y	G	A	N	F	A	E	V	A	V	N	T	R	T	G	E	I	R	L	D	K	F	Y	A	L	L	D	C	G	T	P	V	N	P	E	L	A	L	G	Q	I	Y	G	A	T	L	R	A	I	G	H	S	M	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	Y	A	T	P	K	L	S	W	D	R	L	R	G	Q	G	R	P	F	L	Y	F	A	Y	G	A	A	I	T	E	V	V	I	D	R	L	T	G	E	N	R	I	L	R	T	D	I	L	H	D	A	G	A	S	L	N	P	A	L	D	I	G	Q	I	E	G	A	Y	V	Q	G	A	G	W	L	T	T	E	E
Template Known Secondary structure								S					T	T	T	T						S															T	T	T															B	S		S																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		868	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.		.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.			.	930	.	.	.	.	.	.	.	.	.	940	.	.
Predicted Secondary structure																																								.																								.	.															.	.
Query SS confidence																																								.																								.	.															.	.
Query Sequence		I	I	Y	D	A	E	G	H	P	L	T	R	D	L	R	S	Y	G	A	P	K	I	G	D	I	P	R	D	F	R	A	V	L	V	P	S	D	D	.	K	V	G	P	F	G	A	K	S	I	S	E	I	G	V	N	G	A	A	P	A	I	A	.	.	T	A	I	H	D	A	C	G	I	W	L	R	E	W	.	.
Query Conservation																																								.																								.	.															.	.
Alig confidence																																								.																								.	.															.	.
Template Conservation
Template Sequence		L	V	W	D	H	C	G	R	L	M	T	H	A	P	S	T	Y	K	I	P	A	F	S	D	R	P	R	I	F	N	V	A	L	W	D	Q	P	N	R	E	E	T	I	F	R	S	K	A	V	G	E	P	P	F	L	L	G	I	S	A	F	L	A	L	H	D	A	C	A	A	C	G	P	H	W	P	D	L	Q	A
Template Known Secondary structure				B		T	T	S		B	S			S	T	T	T	S					G	G	G	S		S												S	S			G	G	G	B				S	S	G	G	G	G	G	G													T	T		S	S						S
Template Predicted Secondary structure
Template SS confidence
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
		943	.	.	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	T	P	E	K	I	L	T	A	L	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	T	P	E	A	V	L	A	A	V	R	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		760	.	.	.	.	.	.	.	.	.	770	.	.