 |
| Job Description | Q46814 | | Confidence | 97.38% | Date | Thu Jan 5 12:34:41 GMT 2012 |
| Rank | 62 | Aligned Residues | 68 |
| % Identity | 21% | Template | c2h89B_ |
| PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; |
PDBTitle: avian respiratory complex ii with malonate bound
|
| Resolution | 2.40 Å |
|
| | |
10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | |  |
|
|
| . |
|
|
|  | | | | | | |
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | |
|
| | | | | | | | | | | | | |
|
|
| | | | | |
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | P | Q | E | L | T | V | N | P | . |
G | E | N | V | Q | K | L | L | F | N | M | . |
. |
. |
. |
. |
G | M | H | S | V | R | N | S | D | D | G | F | G | F | A | G | S | D | A | I | I | F | N | G | N | I | V | N | A | S | L | L | I | A | A | Q | L | E | K | A | D | I | R | T | A | E | S | L | G | K |
| Query Conservation | |
| | | | | | | |
| . | | |
|
|
| | |
|
| | | . | . | . | . | . | |
| |
|
|
| |
|
| | |
|
| |
|
|
|
|
|
| |
| | | | |
|
|
|
|
| |
| | | | | |
| | |
|
|
|
|
|
|
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| Template Conservation | |
| |
| |
| | | | | | | |
|
|
| | |
| | |
| | | | |
| | |
| | | | | |
| . | | |
| |
|
|
|
| |
| |
|
|
| | | |
|
|
| |
| |
| | | | | | | | | . | |
|
|
|
| | |
| Template Sequence | |
Q | T | Y | E | V | D | L | N | K | C | G | P | M | V | L | D | A | L | I | K | I | K | N | E | L | D | S | T | L | T | F | R | R | S | C | . |
R | E | G | I | C | G | S | C | A | M | N | I | A | G | G | N | T | L | A | C | T | K | K | I | D | P | D | L | S | K | T | T | . |
K | I | Y | P | L | P | H |
| Template Known Secondary structure | |
| | | | | | G | G | G | S |
| S | B | | | | | | | | | | | | T |
| T | T |
|
|
|
|
|
|
| . | S | S | S | S | S |
| T | T | | | | | T | T | | | | | T | T | T | S | B |
|
|
|
| T | T | S |
| | . | | | |
| S | S | S |
| Template Predicted Secondary structure | |
| | | | | | |
|
|
|
|
|
| | | | | | | | | | | |
|
|
|
| | | | |
|
|
| . |
|
|
|
|
|
|
|
| | | | |
|
| | | |
|
| | | | | | | |
|
|
|
|
| | . | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
