Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7N9
Confidence99.92%DateThu Jan 5 11:06:00 GMT 2012
Rank3Aligned Residues51
% Identity57%Templatec2b9n6_
PDB info PDB header:ribosomeChain: 6: PDB Molecule:50s ribosomal protein l33; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf2,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400.
Resolution6.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50...
Predicted Secondary structure 




















Query SS confidence 


















































Query Sequence  KGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK
Query Conservation 
  
  


 


 

  
 
 

      

 







 


 
 
 
Alig confidence 


















































Template Conservation 
  
  


 






 


 

      

 







 


 
 
 
Template Sequence  DGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKK
Template Known Secondary structure 

BTTB




TTSS





TTS
SS

B




SSSS



B


Template Predicted Secondary structure 






















Template SS confidence 


















































   4.....10.........20.........30.........40.........50....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions