Job Description P60422 Confidence 100.00% Date Thu Jan 5 12:06:47 GMT 2012 Rank 16 Aligned Residues 94 % Identity 62% Template d2zjra2 SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 2.91

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Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	L	E	K	N	S	K	S	G	G	R	N	N	N	G	R	I	T	T	R	H	I	G	G	G	H	K	Q	A	Y	R	I	V	D	F	K	R	.	N	K	D	G	I	P	A	V	V	E	R	L	E	Y	D	P	N	R	S	A	N	I	A	L	V	L	Y	K	D	G	E	R	R	Y	I	L	A	P	K	G	L	K
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		L	T	E	A	L	P	K	T	G	G	R	N	N	R	G	R	I	T	S	R	F	I	G	G	G	H	K	R	L	Y	R	I	I	D	F	K	R	R	D	K	S	G	V	N	A	K	V	A	A	I	E	Y	D	P	N	R	S	A	R	I	A	L	L	H	Y	A	D	G	E	K	R	Y	I	L	A	P	E	G	L	T
Template Known Secondary structure				S			B						B		S	S	S	B		S		S								B				B			S			T	T	T	T												T	T	T	S	S								T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	Q	I	Q	S	G	V	D	A	A	I	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	A	T	V	N	A	G	P	E	A	E	P	K	L
Template Known Secondary structure		T	T						S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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