Job Description P60422 Confidence 100.00% Date Thu Jan 5 12:06:47 GMT 2012 Rank 15 Aligned Residues 124 % Identity 55% Template d2j01d2 SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 2.8

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		A	V	V	K	C	K	P	T	S	P	G	R	R	H	V	V	K	V	V	N	P	E	L	H	K	G	K	P	F	A	P	L	L	E	K	N	S	K	S	G	G	R	N	N	N	G	R	I	T	T	R	H	I	G	G	G	H	K	Q	A	Y	R	I	V	D	F	K	R	N	K	D	.	G	I	P	A	V	V	E	R
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		A	V	K	K	F	K	P	Y	T	P	S	R	R	F	M	T	V	A	D	F	S	E	I	T	K	T	E	P	E	K	S	L	V	K	P	L	K	K	T	G	G	R	N	N	Q	G	R	I	T	V	R	F	R	G	G	G	H	K	R	L	Y	R	I	I	D	F	K	R	W	D	K	V	G	I	P	A	K	V	A	A
Template Known Secondary structure				B					S	S	T	T	T	T	T			B				T	T	S	T	T			S			S	S	S	S		B						S	B	S	S	S	S	B	S	S	T	T									B								G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Y	D	P	N	R	S	A	N	I	A	L	V	L	Y	K	D	G	E	R	R	Y	I	L	A	P	K	G	L	K	A	G	D	Q	I	Q	S	G	V	D	A	A	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	Y	D	P	N	R	S	A	R	I	A	L	L	H	Y	V	D	G	E	K	R	Y	I	I	A	P	D	G	L	Q	V	G	Q	Q	V	V	A	G	P	D	A	P	I	Q
Template Known Secondary structure						T	T		S	S								T	T	S									T	T			T	T						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions