Job Description P60422 Confidence 38.29% Date Thu Jan 5 12:06:47 GMT 2012 Rank 27 Aligned Residues 80 % Identity 18% Template c3d4rE_ PDB info PDB header:unknown function Chain: E: PDB Molecule:domain of unknown function from the pfam-b_34464 family; PDBTitle: crystal structure of a duf2118 family protein (mmp0046) from2 methanococcus maripaludis at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	A	I	K	P	G	N	T	L	P	M	R	N	I	P	V	G	S	T	V	H	N	V	E	M	K	P	G	K	G	G	Q	L	A	R	S	A	G	T	Y	V	Q	I	V	A	R	D	G	A	Y	V	T	L	R	L	R	S	G	E	M	R	K	V	E	A	D	C	R	A	T	L	G	E	V	G	N	A	E
Query Conservation
Alig confidence																																					.	.	.	.																																			.
Template Conservation																																					.	.	.	.																																			.
Template Sequence		K	D	V	L	I	Q	Y	P	D	K	H	T	L	T	Y	L	K	A	G	T	K	L	I	S	V	P	A	E	G	Y	K	V	Y	P	I	.	.	.	.	X	D	F	G	F	R	V	L	K	G	Y	R	L	A	T	L	E	S	K	K	G	D	L	R	Y	V	N	S	P	V	S	G	T	V	.	I	F	X	N	E	I
Template Known Secondary structure		S							T	T	T	T							T	T		B								S	S						.	.	.	.	S			S					T	T									T	T									S	S	S				.
Template Predicted Secondary structure																																					.	.	.	.																																			.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.
		200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	L	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	E	R	A
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions