Job Description P60422 Confidence 100.00% Date Thu Jan 5 12:06:47 GMT 2012 Rank 8 Aligned Residues 173 % Identity 60% Template c2b66D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:50s ribosomal protein l2; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf1,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400 Resolution 5.90 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	R	I	V	D	F	K	R	N	K	D	G	I	P	A	V	V	E	R	L	E	Y	D	P	N	R	S	A	N	I	A	L	V	L	Y	K	D	G	E	R	R	Y	I	L	A	P	K	G	L	K	A	G	D	Q	I	Q	S	G	V	D	A	A	I	K	P	G	N	T	L	P	M	R	N	I	P	V	G	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	R	I	I	D	F	K	R	D	K	D	G	I	P	G	R	V	A	T	I	E	Y	D	P	N	R	S	A	N	I	A	L	I	N	Y	A	D	G	E	K	R	Y	I	I	A	P	K	N	L	K	V	G	M	E	I	M	S	G	P	D	A	D	I	K	I	G	N	A	L	P	L	E	N	I	P	V	G	T	L
Template Known Secondary structure														S				B								S	S	S	S					B		B		S	S	S				B					S		S		S	S					B		S	S					S	S		B			S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	N	V	E	M	K	P	G	K	G	G	Q	L	A	R	S	A	G	T	Y	V	Q	I	V	A	R	D	G	A	Y	V	T	L	R	L	R	S	G	E	M	R	K	V	E	A	D	C	R	A	T	L	G	E	V	G	N	A	E	H	M	L	R	V	L	G	K	A	G	A	A	R	W	R	G	V	R	P	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	N	I	E	L	K	P	G	R	G	G	Q	L	V	R	A	A	G	T	S	A	Q	V	L	G	K	E	G	K	Y	V	I	V	R	L	A	S	G	E	V	R	M	I	L	G	K	C	R	A	T	V	G	E	V	G	N	G	G	R	T	D	K	P	F	V	K	A	G	N	K	H	H	K	M	K	A	P	N	V
Template Known Secondary structure		B		S				S	T	T		S			S		S	S			S		B				S			T	T							T	T	T							S	S					B	S					S	T	T							S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	T	A	M	N	P	V	D	H	P	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	V	A	M	N	A	V	D	H	P	F	G
Template Known Secondary structure				S	S		S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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