 |
Job Description | P60422 | Confidence | 22.78% | Date | Thu Jan 5 12:06:47 GMT 2012 |
Rank | 34 | Aligned Residues | 45 |
% Identity | 18% | Template | c1x65A_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:unr protein; |
PDBTitle: solution structure of the third cold-shock domain of the human2 kiaa0885 protein (unr protein)
|
Resolution | UNK |
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | K | G | L | K | A | G | D | Q | I | Q | S | G | V | D | A | A | I | K | P | G | N | . |
. |
. |
T | L | P | M | R | N | I | P | V | G | S | T | V | H | N | V | E | M | K | P | G | K | G |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
| . | . | . |   |
|
|
|   |   |
|
|   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
G | N | Q | L | H | I | A | D | E | V | E | F | T | V | V | P | D | M | L | S | A | Q | R | N | H | A | I | R | I | K | K | L | P | K | G | T | V | S | F | H | S | H | S | G | P | S | S | G |
Template Known Secondary structure |   |
S |
|
|
|
| T | T |
|
|  |  |  |
|
| B |
|
| S | S | S |
|
|
|
| B |
|
| S |
|  |  |
|
| B | T | T | B |
|
|
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|