Job Description P0A790 Confidence 24.50% Date Thu Jan 5 11:05:05 GMT 2012 Rank 67 Aligned Residues 62 % Identity 13% Template c3n2bD_ PDB info PDB header:lyase Chain: D: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of diaminopimelate2 decarboxylase (lysa) from vibrio cholerae. Resolution 1.80 Å

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		56	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure											.	.																																						.	.	.	.
Query SS confidence											.	.																																						.	.	.	.
Query Sequence		S	T	Y	A	I	A	A	E	R	.	.	G	S	R	I	I	S	V	N	G	A	A	A	H	C	A	S	V	G	D	I	V	I	I	A	S	F	V	T	M	P	D	E	E	A	R	T	W	.	.	.	.	R	P	N	V	A	Y	F	E	G	D	N	E	M	K	R	T	A	K	A
Query Conservation											.	.																																						.	.	.	.
Alig confidence											.	.													.	.																								.	.	.	.									.
Template Conservation																									.	.																																				.
Template Sequence		Q	T	Y	D	L	V	G	P	V	C	E	T	S	D	F	L	G	K	D	R	D	L	V	.	.	L	Q	E	G	D	L	L	A	V	R	S	S	G	A	Y	G	F	T	M	S	S	N	Y	N	T	R	P	R	V	A	E	V	M	V	D	.	G	N	K	T	Y	L	V	R	Q	R
Template Known Secondary structure									S	S	S		T	T											.	.			T	T						S	S		S	S	S	S	G	G	G				T	T	T											.	T	T
Template Predicted Secondary structure																									.	.																																				.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions