Return to main results Retrieve Phyre Job Id

Job DescriptionP0A790
Confidence18.46%DateThu Jan 5 11:05:05 GMT 2012
Rank100Aligned Residues18
% Identity22%Templatec3b76A_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase lnx; PDBTitle: crystal structure of the third pdz domain of human ligand-of-numb2 protein-x (lnx1) in complex with the c-terminal peptide from the3 coxsackievirus and adenovirus receptor
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970......... 80......
Predicted Secondary structure 




..



Query SS confidence 










. .






Query Sequence  ISVNGAAAHCA. . SVGDIVI
Query Conservation 
 







 ..  

 

Alig confidence 










..






Template Conservation 
     
   
 
  

 

Template Sequence  VEPGGVISRDGRIKTGDILL
Template Known Secondary structure 
TTS
SS
TT
Template Predicted Secondary structure 










Template SS confidence 



















   444.....450.........460...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions