 |
Job Description | P11988 | Confidence | 97.80% | Date | Thu Jan 5 11:33:02 GMT 2012 |
Rank | 140 | Aligned Residues | 92 |
% Identity | 14% | Template | d2vzsa5 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| beta-glycanases
|
Resolution | 1.85 |
|
 |
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Y | P | E | D | I | A | L | F | A | E | M | G | F | T | C | L | R | I | S | I | A | W | A | R | I | F | P | Q | G | D | E | V | E | P | N | E | A | G | L | A | F | Y | D | R | L | F | D | E | M | A | Q | A | G | I | K | P | L | V | T | L | S | . |
. |
. |
H | Y | E | M | P | Y | G | L | V | K | N | Y | G | G | W |
Query Conservation |   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   | . | . | . |
|   |
|   |
|   |   |
|   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   | . | . | . |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
Template Sequence |   |
A | A | A | D | K | L | K | Y | V | L | N | L | G | L | N | T | V | R | L | . |
. |
. |
E | G | H | I | E | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | F | F | D | I | A | D | D | L | G | V | L | T | M | P | G | W | E | C | C | D | K | W | E | G | Q | V | N | G | E | E | K | . |
G | E | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | . | . | . |  | S |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
|
| S | S | S | G | G | G | T | T | T | S | T | T | S | S | . | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | |
|
|
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | |
. | . | . |
  |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | R | A | V | I | D | H | F | E | H | Y | A | R | T | V | F | T | R | Y | Q | H | K | . |
. |
V | A | L | W | L | T | F | N | E | I | N |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
| . | . |
|   |   |
|   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
W | V | E | S | D | Y | P | I | A | K | A | S | M | F | S | E | A | E | R | L | R | D | H | P | S | V | I | S | F | H | I | G | S | D | F | A |
Template Known Secondary structure |   |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | B |
|
|  |  | S |
| S | S | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
436 | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|