Return to main results Retrieve Phyre Job Id

Job DescriptionP11988
Confidence48.48%DateThu Jan 5 11:33:02 GMT 2012
Rank281Aligned Residues67
% Identity18%Templated2bvya2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VDFISFSYYMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRY. . . QKPLFIVENGLGAKD
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Template Sequence  VDVLGLDTY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DSTGSDAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGV
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   240........ .250.........260.........270.........280.........
 
   369370.........380.........390....
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Query Sequence  SVEADGSIQDDYRIAYLNDHLVQVNE
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Template Sequence  GTNGSSPAQ. . . . . . WFTKVLAAIKA
Template Known Secondary structure  STTS


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   290........ .300.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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