Return to main results Retrieve Phyre Job Id

Job DescriptionP11988
Confidence96.74%DateThu Jan 5 11:33:02 GMT 2012
Rank148Aligned Residues142
% Identity17%Templated1wdpa1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.27

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120.... .....130..
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Query Sequence  YPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTL. . . . . . . . . . . . SHYEMPYG
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Template Sequence  LKEQLLQLRAAGVDGVMVDVWWGIIELKG. PKQYDWR. . . AYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQW
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   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  LVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKA
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Template Sequence  VLDI. . GESNHDI. . . . . . . . . FYTNRSGTRNKEYLTV. . . . . . . . . . . . GVDNEPIFHGRTAIEIYSDYMKSFRENMSD
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GGG.........
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   111... .....120. ........130....... ..140.........150.........160.......
 
   213.. ....220.........230...
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Query Sequence  CHS. . LLPEAKIGNMLLGGLVYP
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Template Sequence  FLESGLIIDIEVGLGPAGELRYP
Template Known Secondary structure  TT


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   168.170.........180.........190
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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