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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank47Aligned Residues325
% Identity18%Templated1w32a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  AFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRI
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Template Sequence  ASLADFPIGVAVAASGGNADIFTSSARQNI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRAEFNQITAEN
Template Known Secondary structure  GGG
SS
B
SSSTTBTTT
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SSS
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   3......10.........20.........30.. .......40....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  SIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQH
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Template Sequence  IMKMSYMYSGS. NFSF. . . . . TNSDRLVSWAAQNGQTVHGHALVWHPSYQL. PNWASDSNANFRQDFARHIDTVAAHFAG
Template Known Secondary structure  TTSGGGGTT.

.....TT



GGG
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TT
STT
TTTTT
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   45....50..... .... 60.........70.........80......... 90.........100.........110.......
 
   163......170.........180......... 190.........200.........210.........220.........230.........240.
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Query Sequence  KVALWLTFNEINMSLHAPFTGVGLAEE. SGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQPQDM
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Template Sequence  QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYID. . EAFRRARAADPTAELYYN. . . . . . . . . . . . . . . .
Template Known Secondary structure  T
S

B

GGG
TT


TT

TST..
TTS................
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   118.120.........130.........140.........150.........160. ........170.........
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  LQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNILN
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Template Sequence  . . . . . . . . . . . . DFNTEENGAKTTALVNLVQR. . . . . . . . . . . LLNNGVPIDGVGFQMHV. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ............SSTTS
S...........TT





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   180.........190......... 200.........210......
 
   322.......330.........340.........350.. .......360.........370........ .380.......
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Query Sequence  MIPNPHLKSSEWGWQIDPVGLRVLLNTLWDR. YQKPLFIVENGLGAKDSVEADGSIQD. . . . . . . . . . . . . DYRIAYLND
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Template Sequence  . . . . . . . . . . . MNDYPSIANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKE
Template Known Secondary structure  ...........SSSS
TT
SS
S

TTSS
SSS


SGGGGSS

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   217..220.........230.........240.........250.........260.........270.........280.....
 
   388.390.........400.........410...... ...420.........430.........440.........450......
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Query Sequence  HLVQVNEAIADGVDIMGYTSWGPIDLVSA. . . SHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIK
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Template Sequence  IVQAYLEVVPPG. RRGGITVWGIADPDSWLYTHQN. LPDWPLLFNDNLQ. . . . . . . . . . PKPAYQGVVEALS
Template Known Secondary structure  S
TT.
S
SBGGGSTTSTT.


SSB
TTS
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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