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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank31Aligned Residues421
% Identity33%Templated1ug6a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution0.99

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRISIA
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Template Sequence  EKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQ. . . . . . RPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVA
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TTSTT


BTT......STTSSTTS

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   6...10.........20.........30........ .40.........50.........60.........70.........
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  WARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVA
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Template Sequence  WPRILPEG. RGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEER. GGWRSRETAFAFAEYAEAVARALADRVP
Template Known Secondary structure  STTS.SS


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BTT.TGGGSTTT

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Query Sequence  LWLTFNEINMSLHAPFTGVGLAEE. SGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQPQDMLQA
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Template Sequence  FFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAG. ARRVGIVLNFAPAYGE. . . . . DPEAV
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TS
SSTT



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   158.160.........170.........180.........190.........200.........210 .........220...... ...230.
 
   245.. ..250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  MEE. NRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNILNMI
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Template Sequence  DVADRYHNRFFLDPILGKGYPESPFR. . . . DPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTL. . . . . . . PVRY
Template Known Secondary structure  TTTS
S
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   232.......240.........250....... ..260.........270.........280.........290...... ...300
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  PNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRIAYLNDHLVQVNEAIADGVDIM
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Template Sequence  LPPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLR
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SS
B
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SS
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   301........310.........320.........330.........340.........350.........360.........370.........380
 
   404.....410.........420.........430.........440.........450.......
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Query Sequence  GYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKT
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Template Sequence  GYFVWSLMDNFEWAFG. YTRRFGLYYVDFP. . . . . SQRRIPKRSALWYRERIAR
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SB



GGGG.GGS


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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