Job Description P11988 Confidence 99.48% Date Thu Jan 5 11:33:02 GMT 2012 Rank 105 Aligned Residues 296 % Identity 16% Template d1tg7a5 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Glycosyl hydrolases family 35 catalytic domain Resolution 1.90

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	.
Query Conservation																																																																																	.
Alig confidence																																.	.																																																.
Template Conservation																																.	.
Template Sequence		S	L	Y	I	D	I	F	E	K	V	K	A	L	G	F	N	C	V	S	F	Y	V	D	W	A	L	L	E	G	N	.	.	P	G	H	Y	S	A	E	G	I	F	D	L	Q	P	F	F	D	A	A	K	E	A	G	I	Y	L	L	A	R	P	G	P	Y	I	N	A	E	V	S	G	G	G	F	P	G	W	L	Q
Template Known Secondary structure		G	G										T	T	T															S	B	.	.	T	T	B					G	G	G		S											T									S				T	T	B	G	G	G	G			G	G	G	G
Template Predicted Secondary structure																																.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
											142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	.	.	.	.	.	.	.	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A
Query Conservation		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		R	V	D	G	I	L	R	T	S	D	E	A	Y	L	K	A	T	D	N	Y	A	S	N	I	A	A	T	I	A	K	A	Q	I	T	N	G	G	P	I	I	L	Y	Q	P	E	N	E	Y	S	.	.	.	.	.	.	.	.	G	A	C	C	G	Y	N	G	F	P	D	G	S	Y	M	.	.	.	.	.	.	.	.
Template Known Secondary structure		G		S	S		T	T	S	S																						T	B	G	G	G	T	S	S							S	S				.	.	.	.	.	.	.	.				T	T					S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A
Query Conservation
Alig confidence		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	Q	Y	I	E	D	H	A	R	D	A	G	I	V	V	P	F	I	S	N	D	A	W	A	A	G	H	N	A	P	G	T	G	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.										T	T			S		B	B			B	S	S	S	S		T	T		T	T	S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	Q	K	P	L	F	I	V	E	N	G	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	D	I	Y	G	H	D	S	Y	P	L	G	F	D	C	A	N	P	S	T	W	P	S	G	N	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	F	H	T	S	H	E	Q	Q	S	P	S	T	P	Y	S	L	V	E	F	Q	G	G
Template Known Secondary structure		.	.	.	.	.	.		S	B							T	T		S			S		T	T				T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S									S	S
Template Predicted Secondary structure		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.																								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q	M	S	K	R	Y	G	F	I	Y	V	D	R	D	D	N	G	E	G	S	L	T	R	T	R	K
Query Conservation
Alig confidence																												.																												.						.	.	.	.	.
Template Conservation																												.																												.						.	.	.	.	.
Template Sequence		A	F	D	P	W	G	G	V	G	F	A	K	C	A	A	L	L	N	H	E	F	E	R	V	F	Y	.	K	N	D	F	S	F	G	V	A	F	L	N	L	Y	M	I	F	G	G	T	N	W	G	N	L	G	H	.	P	G	G	Y	T	.	.	.	.	.	S	Y	D	Y	G	S	A	I	S	E	S	R	N	I	T
Template Known Secondary structure						T	T											T	S									.					T	T	T		S							S	B			B			T	T		B		.	T	T	S		S	.	.	.	.	.	B			T	T		S	B		T	T
Template Predicted Secondary structure																												.																												.						.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.						.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	F	G	W	Y	A	E	V	I	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	K	Y	S	E	L	K	L	L	G	N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions