Job Description P11988 Confidence 99.97% Date Thu Jan 5 11:33:02 GMT 2012 Rank 51 Aligned Residues 302 % Identity 17% Template d1rh9a1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.50

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	.	.	.	.	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.									.	.
Template Conservation																																				.	.
Template Sequence		I	K	V	T	N	T	F	Q	Q	A	S	K	Y	K	M	N	V	A	R	T	W	A	F	S	H	G	G	S	R	P	L	Q	S	A	.	.	P	G	V	Y	N	E	Q	M	F	Q	G	L	D	F	V	I	S	E	A	K	K	Y	G	I	H	L	I	M	S	L	V	N	N	W	D	A	F	G	G	K	K	Q	Y	V
Template Known Secondary structure														T	T								S	S		S	S	S	S	S		S				.	.	T	T																				T	T									B	S	S	S	S	S	S	B
Template Predicted Secondary structure																																				.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		139	140																.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.					.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.					.	.
Query Sequence		G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	.	.	.	.	.	.	.	.	Y	Q	H	K	.	.	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P	F	T	G	V	G	L	A	E	E	S	G	E	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.					.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.					.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	W	A	V	Q	R	G	Q	K	L	T	S	D	D	D	F	F	T	N	P	M	V	K	G	F	Y	K	N	N	V	K	V	V	L	T	R	V	N	T	I	T	K	V	A	Y	K	D	D	P	T	I	L	S	W	E	L	I	N	E	P	R	C	P	S	D	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T						G	G	G	G	G	T																			B		T	T	T		S	B	G	G	G		T	T						S		B	S				T	T		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D	M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	T	F	Q	N	W	V	L	E	M	A	G	Y	L	K	S	I	D	S	N	H	L	L	E	I	G	L	E	G	F	Y	G	N	D	M	R	Q	Y	N	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.																				S	S												G	G	G	G	G	G	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y	M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y
Query Conservation
Alig confidence		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	Y	I	F	G	T	N	F	I	S	N	N	Q	V	Q	G	I	D	F	T	T	I	H	M	Y	P	N	Q	W	L	P	G	L	T	Q	E	A	Q	D	K	W	A	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	I	Q	V	H	I	D	D	S	K	M	L
Template Known Secondary structure		.	.	G				S								T	S	T	T														S	T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.																							.	300	.	.	.	.	.	.	.	.	.	310
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	P	L	F	I	V	E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q	M	S	K	R	Y	G	F	I	Y	V	D	R	D
Query Conservation
Alig confidence																.	.	.	.	.																																									.	.						.
Template Conservation																.	.	.	.	.																																									.	.						.
Template Sequence		K	K	P	L	L	I	A	E	F	G	K	S	T	K	.	.	.	.	.	T	P	G	Y	T	V	A	K	R	D	N	Y	F	E	K	I	Y	G	T	I	F	N	C	A	K	S	G	G	P	C	G	G	G	L	F	W	Q	V	L	G	.	.	Q	G	M	S	S	.	F	D	D	G	Y	Q	V	V	L	Q	E	S	P
Template Known Secondary structure		T	S											T	T	.	.	.	.	.	S	T	T																							T	T		S							S		B			.	.	T	T		G	G	.	G			S			B		G	G	G
Template Predicted Secondary structure																.	.	.	.	.																																									.	.						.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	G	E	G	S	L	T	R	T	R	K	K	S	F	G	W	Y	A	E	V
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	T	S	R	V	I	L	L	Q	S	L	R	L	S	K	L
Template Known Secondary structure		.	.	.	.	.														T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions