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Job DescriptionP11988
Confidence99.86%DateThu Jan 5 11:33:02 GMT 2012
Rank73Aligned Residues307
% Identity17%Templated1r85a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRIS
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Template Sequence  YKNEFTIGAAVEPYQLQN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKDVQ. . MLKRHFNSIVAENV
Template Known Secondary structure  TTT

GGGGG
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SSST
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   24.....30.........40. ..... ...50.........60
 
   84.....90.........100.........110.........120 .........130......... 140........
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Query Sequence  IAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKP. . LVTLSHYEMPYGLVKNYGG. . . . . . . . . . . . . WANRAVIDH
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Template Sequence  MKPISIQPEEGKFNFEQA. . . . . DRIVKFAKANGMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKR
Template Known Secondary structure  TS
SBTTB


.....TT

S

STT

GGGGB
TTSSBGGG


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   61........70........ .80.........90.........100.........110.........120.........130.....
 
   149150.........160.........170.........180.........190.........200.........210...... ...220.......
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Query Sequence  FEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSL. LPEAKIGNMLL
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Template Sequence  LETHIKTIVERYKDDIKYWDVVNEVV. . . . . . . . . . GDDGKLRNSPWYQIAGIDYIK. . VAFQAARKYGGDNIKLYMNDY
Template Known Secondary structure  TTT

S
B..........
TTSSB


TT..
TTSS
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   136...140.........150.........160. ........170.........180.. .......190.........200...
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  GGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSH
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Template Sequence  N. . . . . . . . . . . . . . . . . . . . . . . . . . . . . TEVEPKRTALYNLVKQ. . . . . . . . . . . LKEEGVPIDGIGHQSHI. . . . . .
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.............................TTSTT...........TT





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   204 .....210.........220 .........230.......
 
   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  DESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRIAYLND
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . QIGWPSEAEIEKTINMF. AALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLD
Template Known Secondary structure  .........................
SSSS
.TT

SS
SS



SSGGGS
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   238.240.........250.... .....260.........270.........280.........290.
 
   388.390...... ...400.........410.........420...... ...430......
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Query Sequence  HLVQVNEAI. . . . ADGVDIMGYTSWGPIDLVSASHSQMSKRYG. . . . . . . . . . . . . . . . . . . . . . . . . . . FIYVDRDDNG
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Template Sequence  QAARYDRLFKLYEKLSDKISNVTFWGIADNHTWLDS. RADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYK. . .
Template Known Secondary structure  TGGGSSSSTTS
GGGG.G


TTS


TTS

STT
S



SSB
TTSB...
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   292.......300.........310.........320....... ..330.........340.........350.........360.......
 
   437..440.........450...
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Query Sequence  EGSLTRTRKKSFGWYAE
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Template Sequence  . . . . . . . VKPAYWAIID
Template Known Secondary structure  .......B
S
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   368.370.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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