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Job DescriptionP11988
Confidence98.36%DateThu Jan 5 11:33:02 GMT 2012
Rank124Aligned Residues230
% Identity21%Templated1nofa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.42

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MGFTCLRISI. . . . . AWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNY. . . . GGWANRAV
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Template Sequence  IGLSIMRVRIDPDSSKWNIQLP. . . . . . . . . . . . . . . . . SARQAVSLGAKIMAT. . PWSPPAYMKSNNSLINGGRLLPAN
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SSGGGGGGG.................TT
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S


GGGBTTSSSBS

BB
GGG
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   75....80.........90...... ...100.........110. ........120.........130.....
 
   146...150.........160.. .......170.........180.........190.........200.........210.........220..
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Query Sequence  IDHFEHYARTVFTRYQH. . . KVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKI
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Template Sequence  YSAYTSHLLDFSKYMQTNGAPLYAISIQNEPDW. . KPDYESCEWSG. . . . . . . . . . . . . . . DEFKSYLKSQGSKFGSLKV
Template Known Secondary structure  TT


SS
S
TT
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SSB

B

...............GGGGTTS
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   136...140.........150.........160........ .170......... 180.........190........
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  GNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMT
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Template Sequence  IVAESLGF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NPALTDPVLKD. . . . . . . . . . . . SDASKYVSIIGGHLYGT
Template Known Secondary structure  TT
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GGGTT
............TT


TTS
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   199200...... ...210....... ..220.........230....
 
   303......310.........320.........330.........340.........350.........360.........370.........380..
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Query Sequence  GCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRI
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Template Sequence  TPKPYP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAQNAGKQLWMTEHYVDSKQ. . . . . . . . . SANNW
Template Known Secondary structure 




........................................TT

S
TTS.........
TT
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   235....240 .........250.........260 .....
 
   383......390.........400.........410.........420.........430.........440.........450......
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Query Sequence  AYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIK
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Template Sequence  TSAIEVGTELNASMVS. . NYSAYVWWYIRRSY. . . . . . . . . . . GLLTEDGK. . . . . . . . . . VSKRGYVMSQYAR
Template Known Secondary structure  T..TSBSTT...........SSB
TTS
..........B
T
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   266...270.........280. ........290..... ....300... ......310......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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