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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank46Aligned Residues307
% Identity15%Templated1n82a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRIS
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Template Sequence  FANDFRIGAAVNPVTIEM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QKQL. . . . . LIDHVNSITAENH
Template Known Secondary structure  TTTT

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SSST
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   12.......20......... 30... ......40......
 
   84.....90.........100.........110......... 120.........130......... 140.........150........
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Query Sequence  IAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIK. . PLVTLSHYEMPYGLVKNYGG. . . WANRAVIDHFEHYARTVFT
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Template Sequence  MKFEHLQPEEGKFTF. . . . . QEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQD. GQGHFVSRDVLLERMKCHISTVVR
Template Known Secondary structure  TS
SBTTB


.....TT
SSS

GGGGB
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   47..50.........60. ........70.........80.........90...... ...100.........110.........120
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  RYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQP
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Template Sequence  RYKGKIYCWDVINEAVADEGDELLRPSKWRQIIGDD. . . . . . . . . . FMEQAFLYAYEADPDALLFYNDYNECFPEKREKI
Template Known Secondary structure  TTT

S
B
SSSS
SB



TT..........
TTSSSTTS
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   121........130.........140.........150...... ...160.........170.........180.........190
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  QDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGN
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Template Sequence  FA. . . . . . . . . . . . . . . . . . . . . . . . . . LVKSLRDKGIP. . . . . . . . . . . . . . IHGIGMQAHW. . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..........................TT

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   191. .......200... ......210...
 
   319320.........330.........340.........350.........360.........370.........380....... ..390.....
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Query Sequence  ILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRIAYLND. . . HLVQVNEA
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Template Sequence  . . . . . . . . . . . . . . SLTRPSLDEIRAAIERY. ASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF
Template Known Secondary structure  ..............SSSS
.TTT
SS
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   214.....220.........230 .........240.........250.........260.........270........
 
   396...400.........410.........420... ......430.........440.........450....
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Query Sequence  IADGVDIMGYTSWGPIDLVSASHSQMSK. . . . . RYGFIYVDRDDNGEGSLTRTRKKSFGWYAEV
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Template Sequence  KEYRDVIQSVTFWGIADDHTWLDN. FPVHGRKNWPLLFDEQHK. . . . . . . . . . PKPAFWRAVSV
Template Known Secondary structure  TTTTS
SBTTS
GGGT.SSSTT




SSB
TTS
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   279280.........290.........300.. .......310.........320 .........330.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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