Job Description P11988 Confidence 93.51% Date Thu Jan 5 11:33:02 GMT 2012 Rank 171 Aligned Residues 108 % Identity 15% Template d1m7xa3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.30

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	D	F	Y	H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		I	Y	E	V	H	L	G	S	W	R	R	H	T	D	N	N	F	W	L	S	Y	R	E	L	A	D	Q	L	V	P	Y	A	K	W	M	G	F	T	H	L	E	L	L	P	I	N	E	H	P	F	D	G	S	W	G	Y	Q	P	T	G	L	Y	A	P	T	R	R	F	G	T	.	.	.	.	.	.	.	R	D	D
Template Known Secondary structure							T	T	S	S		B		T	T	T			B																	T	T		S					S						S		G	G	G	T	T	S	S		S							G	G	G	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.								.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		F	R	Y	F	I	D	A	A	H	A	A	G	L	N	V	I	L	D	W	V	P	G	H	F	P	T	D	D	F	A	L	A	E	F	D	G	T	N	L	Y	E	H	S	T	L	I	Y	.	.	.	.	.	.	N	Y	G	R	R	E	V	S	N	F	L	V	G	N	A	L	Y	W	I	E	R	F	G
Template Known Secondary structure												T	T									T	T	S				S	T	T	S	S	T	T	G	G	G	S		S	S	B						B	.	.	.	.	.	.		T	T	S																		S
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions