Return to main results Retrieve Phyre Job Id

Job DescriptionP11988
Confidence99.54%DateThu Jan 5 11:33:02 GMT 2012
Rank99Aligned Residues149
% Identity15%Templated1h4pa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DFYHRY. . PEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLS. . . . . . . HYEMP
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Template Sequence  SHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNS
Template Known Secondary structure  S
TT

GGGT


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SSTT

TT
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GGG
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   131........140.........150.........160... ......170.........180.........190.........200.....
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Query Sequence  YGLVKNYGGWANRAVIDHFEHYARTVFTRYQHK. . . . . VALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVA
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Template Sequence  GLRDS. . YKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVL. . . . . . . . . . . . . . . . . . DMDKMKNDY
Template Known Secondary structure  SSTT
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TTSTTSTTS
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   188.190.. .......200.........210.........220.........230........ .240.......
 
   206...210.........220........
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Query Sequence  SARAVKACHSLLPEAKIGNMLLG
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Template Sequence  LAPAYEYLRNNIKSDQVIIIHDA
Template Known Secondary structure  TT





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   248.250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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