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Job DescriptionP11988
Confidence99.87%DateThu Jan 5 11:33:02 GMT 2012
Rank72Aligned Residues252
% Identity18%Templated1foba_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSH. . . YEMPYGLVKNYGGWAN. . .
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Template Sequence  ETILADAGINSIRQRV. W. . VNPSDGSYD. . . . . LDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTP. SGWSTTDL
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Query Sequence  RAVIDHFEHYARTVFTRY. . . QHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPE
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Template Sequence  GTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRA. . . . . . . GLLWPLGETSS. . . . . YSNIGALLHSGAWGVKDSNLA
Template Known Secondary structure  TT


SSSSGGG.......
SSBTTTSTT
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   104.....110.........120.........130......... 140.........150 .........160.........170.
 
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Query Sequence  AKIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSY
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Template Sequence  TTPKIM. . . . . IHLDDGWSWDQQNYFYETVLATGELLSTD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FDYFGVSY
Template Known Secondary structure  S

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TT
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   172..... ..180.........190.........200...... ...210....
 
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Query Sequence  YMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDD
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Template Sequence  Y. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PFYSASATLASLKTSLANLQSTYDKPVVVVETNWPVSCPNPAYAFPSDL
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   215 ....220.........230.........240.........250.........260....
 
   380. ........390.........400........
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Query Sequence  YR. . . . IAYLNDHLVQVNEAIADGVDIMGYTSW
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Template Sequence  SSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYW
Template Known Secondary structure  TTS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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