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Job DescriptionP11988
Confidence100.00%DateThu Jan 5 11:33:02 GMT 2012
Rank39Aligned Residues296
% Identity19%Templated1fh9a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.72

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRISIA
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Template Sequence  AGRDFGFALDPNRLSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AQYKAIA. . DSEFNLVVAENAMK
Template Known Secondary structure  TT

GGGGGS...........................................
SSSTTS
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   11........20...... ...30... ......40.......
 
   86...90.........100.........110.........120.. .......130.........140.........150.........160...
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Query Sequence  WARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLV. . TLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHK
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Template Conservation 
  


  
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Template Sequence  WDATEPSQNSFSF. . . . . GAGDRVASYAADTGKELYGHTLVWHSQLPDWA. . . . KNLNGSAFESAMVNHVTKVADHFEGK
Template Known Secondary structure 
SBTTB


.....T
SSS

....T

TTTT
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   48.50.........60 .........70.........80.........90.. .......100.........110........
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  VALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQPQDMLQ
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Template Sequence  VASWDVVNEAFADGGGRRQDSAFQQKLGNG. . . . . . . . . . . YIETAFRAARAADPTAKLCINDYNVEGINA. . . . . . . . .
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B
TTSSB
SS

TT...........
SSSSS
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   119120.........130.........140........ .150.........160.........170........
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  AMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNILNMI
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Template Sequence  . . . . . . . . . . . . . . . . KSNSLYDLVKDFKARGVP. . . . . . . . . . . . . . LDCVGFQSH. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................T

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   179180.........190...... ...200.....
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  PNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRIAYLNDHLVQVNEAIADGVDIM
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Template Sequence  . . . . . . . . . LIVGQVPGDFRQNLQRF. ADLGVDVRITELDIRMRTPS. . . . . . . DATKLATQAADYKKVVQACMQVTRCQ
Template Known Secondary structure  .........TT


TT.TTT
SS
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TSTT
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   206...210.........220.. .......230.........240.. .......250.........260........
 
   404.....410.........420... ......430.........440.........450....
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Query Sequence  GYTSWGPIDLVSASHSQMSK. . . RYGFIYVDRDDNGEGSLTRTRKKSFGWYAEV
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Template Sequence  GVTVWGITDKYSWVPD. VFPGEGAALVWDASYA. . . . . . . . . . KKPAYAAVMEA
Template Known Secondary structure  S
SBTTT
S.STT

SSB
TTS
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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