Job Description P11988 Confidence 75.01% Date Thu Jan 5 11:33:02 GMT 2012 Rank 249 Aligned Residues 84 % Identity 18% Template d1cxla4 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.81

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	Q	P	H	G	V	M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	Y	H	R	Y	P	E	D	I	A	.	.	L	F	A	E	M	G	F	T	C	L	R	I	S	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	F	S	T	D	V	I	Y	Q	I	F	T	D	R	F	S	D	G	N	P	A	N	N	P	T	G	A	A	F	D	G	T	C	T	N	L	R	L	Y	C	G	G	D	W	Q	G	I	I	N	K	I	N	D	G	Y	L	T	G	M	G	V	T	A	I	W	I	S	Q	P	V	E	N	I	Y	S	I	I	N	Y
Template Known Secondary structure		T			T	T														S		G	G	G				G	G	G	B		T	T			S	T	T	S	B														T	T	T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
															84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P	L	V	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.
Template Sequence		S	G	V	N	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	A	Y	G	T	.	.	.	.	.	.	.	I	A	D	F	Q	N	L	I	A	A	A	H	A	K	N	I	K	V	I	I	D	F
Template Known Secondary structure		T	T					S	T	T	S		S									T	T	T			.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions