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Job DescriptionP11988
Confidence98.79%DateThu Jan 5 11:33:02 GMT 2012
Rank116Aligned Residues132
% Identity12%Templatec3thdD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of human beta-galactosidase in complex with 1-2 deoxygalactonojirimycin
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FYHR. . . . . YPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYE. . . . . . .
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Template Sequence  HYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPW. . PGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMG
Template Known Secondary structure 
GGGS
GGGTT
S


SB..TTB


SGGG
TT


S


TTBGGG
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   56...60.........70.........80.........90.. .......100.........110.........120.........130...
 
   129130.........140 .........150.........160... ......170.........180.........190.......
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Query Sequence  . MPYGLVKNYGGW. . . ANRAVIDHFEHYARTVFTRYQHK. . . . . . . VALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQ
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Template Sequence  GLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGS. . . . . . . . . . . . YFACDFDYLR
Template Known Secondary structure  G

GGGGGSTT

SSS

GGGBGGGTSS
SS
GGG............SS


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   134.....140.........150.........160.........170.........180.........190. ........200.
 
   198.200......
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Query Sequence  AIHHQLVAS
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Template Sequence  FLQKRFRHH
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   202.......210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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